Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CD53P19397 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.22■□□□□ 0.51
CD53P19397 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CD53P19397 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.22■□□□□ 0.51
CD53P19397 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD53P19397 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD53P19397 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD53P19397 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.22■□□□□ 0.51
CD53P19397 MIPEPP3-201ENST00000412105 444 ntBASIC18.22■□□□□ 0.51
CD53P19397 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.22■□□□□ 0.51
CD53P19397 TERF1P5-201ENST00000477545 1207 ntBASIC18.22■□□□□ 0.51
CD53P19397 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CD53P19397 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD53P19397 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.22■□□□□ 0.51
CD53P19397 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD53P19397 AC068338.2-201ENST00000563278 1430 ntBASIC18.22■□□□□ 0.51
CD53P19397 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CD53P19397 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CD53P19397 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD53P19397 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD53P19397 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD53P19397 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CD53P19397 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD53P19397 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.21■□□□□ 0.51
CD53P19397 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.21■□□□□ 0.51
CD53P19397 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD53P19397 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.21■□□□□ 0.51
CD53P19397 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD53P19397 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD53P19397 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CD53P19397 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD53P19397 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CD53P19397 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CD53P19397 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.21■□□□□ 0.51
CD53P19397 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.21■□□□□ 0.51
CD53P19397 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.21■□□□□ 0.51
CD53P19397 CYP2T1P-201ENST00000432607 1285 ntBASIC18.21■□□□□ 0.51
CD53P19397 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD53P19397 SLC7A5P1-201ENST00000568957 537 ntBASIC18.21■□□□□ 0.51
CD53P19397 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.21■□□□□ 0.51
CD53P19397 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.21■□□□□ 0.51
CD53P19397 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.21■□□□□ 0.51
CD53P19397 MKRN4P-201ENST00000444706 1521 ntBASIC18.21■□□□□ 0.51
CD53P19397 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.21■□□□□ 0.51
CD53P19397 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD53P19397 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.21■□□□□ 0.51
CD53P19397 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CD53P19397 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD53P19397 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CD53P19397 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CD53P19397 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD53P19397 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD53P19397 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CD53P19397 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.2■□□□□ 0.5
CD53P19397 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD53P19397 PRORSD1P-201ENST00000295112 541 ntBASIC18.2■□□□□ 0.5
CD53P19397 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.2■□□□□ 0.5
CD53P19397 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CD53P19397 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CD53P19397 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.2■□□□□ 0.5
CD53P19397 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.2■□□□□ 0.5
CD53P19397 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.2■□□□□ 0.5
CD53P19397 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.2■□□□□ 0.5
CD53P19397 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD53P19397 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD53P19397 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD53P19397 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CD53P19397 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CD53P19397 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.2■□□□□ 0.5
CD53P19397 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD53P19397 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.19■□□□□ 0.5
CD53P19397 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.19■□□□□ 0.5
CD53P19397 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CD53P19397 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.19■□□□□ 0.5
CD53P19397 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.19■□□□□ 0.5
CD53P19397 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD53P19397 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD53P19397 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.19■□□□□ 0.5
CD53P19397 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.19■□□□□ 0.5
CD53P19397 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.19■□□□□ 0.5
CD53P19397 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
CD53P19397 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CD53P19397 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.19■□□□□ 0.5
CD53P19397 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.19■□□□□ 0.5
CD53P19397 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.19■□□□□ 0.5
CD53P19397 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CD53P19397 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.19■□□□□ 0.5
CD53P19397 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CD53P19397 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CD53P19397 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.19■□□□□ 0.5
CD53P19397 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.19■□□□□ 0.5
CD53P19397 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CD53P19397 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD53P19397 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.18■□□□□ 0.5
CD53P19397 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CD53P19397 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CD53P19397 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.18■□□□□ 0.5
CD53P19397 PCDHAC2-203ENST00000615316 3011 ntBASIC18.18■□□□□ 0.5
CD53P19397 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD53P19397 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms