Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCNAP12004 AL512408.1-201ENST00000569378 2000 ntBASIC19.56■□□□□ 0.72
PCNAP12004 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCNAP12004 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PCNAP12004 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PCNAP12004 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCNAP12004 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCNAP12004 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCNAP12004 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCNAP12004 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCNAP12004 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCNAP12004 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.55■□□□□ 0.72
PCNAP12004 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCNAP12004 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCNAP12004 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCNAP12004 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCNAP12004 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCNAP12004 KRT8P36-201ENST00000489121 1440 ntBASIC19.55■□□□□ 0.72
PCNAP12004 AL162412.1-201ENST00000567129 965 ntBASIC19.55■□□□□ 0.72
PCNAP12004 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.55■□□□□ 0.72
PCNAP12004 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.55■□□□□ 0.72
PCNAP12004 AC231657.2-201ENST00000624556 255 ntBASIC19.55■□□□□ 0.72
PCNAP12004 AC112907.3-201ENST00000577781 2400 ntBASIC19.55■□□□□ 0.72
PCNAP12004 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCNAP12004 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PCNAP12004 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCNAP12004 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCNAP12004 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCNAP12004 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCNAP12004 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.55■□□□□ 0.72
PCNAP12004 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCNAP12004 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCNAP12004 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCNAP12004 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCNAP12004 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PCNAP12004 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCNAP12004 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCNAP12004 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCNAP12004 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
PCNAP12004 AC004911.1-201ENST00000416316 871 ntBASIC19.54■□□□□ 0.72
PCNAP12004 PGM5P4-201ENST00000421970 445 ntBASIC19.54■□□□□ 0.72
PCNAP12004 CYP2T1P-201ENST00000432607 1285 ntBASIC19.54■□□□□ 0.72
PCNAP12004 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.54■□□□□ 0.72
PCNAP12004 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.54■□□□□ 0.72
PCNAP12004 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PCNAP12004 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCNAP12004 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCNAP12004 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCNAP12004 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCNAP12004 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.54■□□□□ 0.72
PCNAP12004 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCNAP12004 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.54■□□□□ 0.72
PCNAP12004 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
PCNAP12004 CYP21A1P-202ENST00000354927 1481 ntBASIC19.54■□□□□ 0.72
PCNAP12004 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.53■□□□□ 0.72
PCNAP12004 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCNAP12004 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCNAP12004 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.53■□□□□ 0.72
PCNAP12004 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PCNAP12004 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCNAP12004 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
PCNAP12004 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
PCNAP12004 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
PCNAP12004 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCNAP12004 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.53■□□□□ 0.72
PCNAP12004 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCNAP12004 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.53■□□□□ 0.72
PCNAP12004 RARRES2P4-201ENST00000514074 484 ntBASIC19.53■□□□□ 0.72
PCNAP12004 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.53■□□□□ 0.72
PCNAP12004 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCNAP12004 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCNAP12004 AL137784.2-201ENST00000607332 1000 ntBASIC19.53■□□□□ 0.72
PCNAP12004 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.53■□□□□ 0.72
PCNAP12004 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.53■□□□□ 0.72
PCNAP12004 AC092437.1-201ENST00000624794 1048 ntBASIC19.53■□□□□ 0.72
PCNAP12004 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.53■□□□□ 0.72
PCNAP12004 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
PCNAP12004 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.53■□□□□ 0.72
PCNAP12004 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCNAP12004 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCNAP12004 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PCNAP12004 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
PCNAP12004 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
PCNAP12004 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCNAP12004 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PCNAP12004 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PCNAP12004 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCNAP12004 AC087633.2-202ENST00000565166 1439 ntBASIC19.52■□□□□ 0.72
PCNAP12004 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCNAP12004 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PCNAP12004 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCNAP12004 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
PCNAP12004 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCNAP12004 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCNAP12004 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCNAP12004 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PCNAP12004 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.52■□□□□ 0.72
PCNAP12004 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCNAP12004 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.52■□□□□ 0.72
PCNAP12004 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms