Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SRFP11831 AL031985.4-201ENST00000642138 673 ntBASIC20.51■□□□□ 0.87
SRFP11831 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SRFP11831 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRFP11831 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.51■□□□□ 0.87
SRFP11831 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRFP11831 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SRFP11831 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SRFP11831 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.5■□□□□ 0.87
SRFP11831 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.5■□□□□ 0.87
SRFP11831 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SRFP11831 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SRFP11831 AC006011.2-201ENST00000621313 1158 ntBASIC20.5■□□□□ 0.87
SRFP11831 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SRFP11831 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SRFP11831 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SRFP11831 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SRFP11831 AC242852.2-201ENST00000615738 1807 ntBASIC20.5■□□□□ 0.87
SRFP11831 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SRFP11831 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.5■□□□□ 0.87
SRFP11831 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SRFP11831 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SRFP11831 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
SRFP11831 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SRFP11831 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.5■□□□□ 0.87
SRFP11831 FSCN1P1-201ENST00000568912 1481 ntBASIC20.5■□□□□ 0.87
SRFP11831 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.49■□□□□ 0.87
SRFP11831 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SRFP11831 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SRFP11831 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.49■□□□□ 0.87
SRFP11831 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SRFP11831 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.49■□□□□ 0.87
SRFP11831 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SRFP11831 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.49■□□□□ 0.87
SRFP11831 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.49■□□□□ 0.87
SRFP11831 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SRFP11831 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SRFP11831 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.48■□□□□ 0.87
SRFP11831 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SRFP11831 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SRFP11831 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SRFP11831 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SRFP11831 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SRFP11831 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
SRFP11831 AC026271.3-201ENST00000571884 352 ntBASIC20.48■□□□□ 0.87
SRFP11831 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SRFP11831 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SRFP11831 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SRFP11831 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SRFP11831 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SRFP11831 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SRFP11831 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SRFP11831 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SRFP11831 C9orf163-202ENST00000624034 2573 ntBASIC20.47■□□□□ 0.87
SRFP11831 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SRFP11831 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SRFP11831 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SRFP11831 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SRFP11831 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SRFP11831 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.47■□□□□ 0.87
SRFP11831 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SRFP11831 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SRFP11831 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SRFP11831 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.47■□□□□ 0.87
SRFP11831 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.47■□□□□ 0.87
SRFP11831 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.47■□□□□ 0.87
SRFP11831 EGLN1P1-201ENST00000531623 762 ntBASIC20.47■□□□□ 0.87
SRFP11831 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SRFP11831 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.47■□□□□ 0.87
SRFP11831 AP005242.2-201ENST00000580065 1175 ntBASIC20.47■□□□□ 0.87
SRFP11831 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.47■□□□□ 0.87
SRFP11831 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
SRFP11831 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SRFP11831 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SRFP11831 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SRFP11831 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.46■□□□□ 0.87
SRFP11831 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SRFP11831 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SRFP11831 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.46■□□□□ 0.87
SRFP11831 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SRFP11831 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.46■□□□□ 0.87
SRFP11831 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SRFP11831 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.46■□□□□ 0.87
SRFP11831 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.46■□□□□ 0.87
SRFP11831 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.46■□□□□ 0.87
SRFP11831 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SRFP11831 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SRFP11831 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.46■□□□□ 0.87
SRFP11831 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SRFP11831 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SRFP11831 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SRFP11831 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.45■□□□□ 0.86
SRFP11831 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SRFP11831 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SRFP11831 TSPY14P-201ENST00000303979 915 ntBASIC20.45■□□□□ 0.86
SRFP11831 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.45■□□□□ 0.86
SRFP11831 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.45■□□□□ 0.86
SRFP11831 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SRFP11831 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SRFP11831 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms