Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GPC4O75487 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.11■□□□□ 0.81
GPC4O75487 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.11■□□□□ 0.81
GPC4O75487 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
GPC4O75487 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.11■□□□□ 0.81
GPC4O75487 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.11■□□□□ 0.81
GPC4O75487 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GPC4O75487 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GPC4O75487 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GPC4O75487 AC020907.5-201ENST00000624372 1936 ntBASIC20.11■□□□□ 0.81
GPC4O75487 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GPC4O75487 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
GPC4O75487 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GPC4O75487 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.11■□□□□ 0.81
GPC4O75487 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
GPC4O75487 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
GPC4O75487 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.1■□□□□ 0.81
GPC4O75487 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
GPC4O75487 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
GPC4O75487 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.1■□□□□ 0.81
GPC4O75487 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.1■□□□□ 0.81
GPC4O75487 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GPC4O75487 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.1■□□□□ 0.81
GPC4O75487 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.1■□□□□ 0.81
GPC4O75487 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GPC4O75487 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.1■□□□□ 0.81
GPC4O75487 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GPC4O75487 CROCCP5-201ENST00000436658 830 ntBASIC20.1■□□□□ 0.81
GPC4O75487 AL050303.2-201ENST00000619798 666 ntBASIC20.1■□□□□ 0.81
GPC4O75487 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.1■□□□□ 0.81
GPC4O75487 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.1■□□□□ 0.81
GPC4O75487 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
GPC4O75487 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
GPC4O75487 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.1■□□□□ 0.81
GPC4O75487 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GPC4O75487 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.1■□□□□ 0.81
GPC4O75487 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GPC4O75487 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.1■□□□□ 0.81
GPC4O75487 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GPC4O75487 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GPC4O75487 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
GPC4O75487 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
GPC4O75487 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
GPC4O75487 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
GPC4O75487 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
GPC4O75487 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GPC4O75487 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
GPC4O75487 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GPC4O75487 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.09■□□□□ 0.81
GPC4O75487 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
GPC4O75487 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
GPC4O75487 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
GPC4O75487 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GPC4O75487 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
GPC4O75487 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.09■□□□□ 0.81
GPC4O75487 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.09■□□□□ 0.81
GPC4O75487 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.09■□□□□ 0.81
GPC4O75487 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.09■□□□□ 0.81
GPC4O75487 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
GPC4O75487 AC100791.3-201ENST00000617619 330 ntBASIC20.09■□□□□ 0.81
GPC4O75487 OR10C1-204ENST00000622521 1039 ntBASIC20.09■□□□□ 0.81
GPC4O75487 MIR2861-201ENST00000636310 90 ntBASIC20.09■□□□□ 0.81
GPC4O75487 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
GPC4O75487 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
GPC4O75487 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.09■□□□□ 0.81
GPC4O75487 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
GPC4O75487 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
GPC4O75487 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
GPC4O75487 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
GPC4O75487 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
GPC4O75487 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
GPC4O75487 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.08■□□□□ 0.81
GPC4O75487 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.08■□□□□ 0.81
GPC4O75487 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
GPC4O75487 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
GPC4O75487 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
GPC4O75487 AC133552.2-202ENST00000575694 574 ntBASIC20.08■□□□□ 0.81
GPC4O75487 AC069236.1-201ENST00000604339 616 ntBASIC20.08■□□□□ 0.81
GPC4O75487 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.8
GPC4O75487 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.08■□□□□ 0.8
GPC4O75487 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
GPC4O75487 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
GPC4O75487 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
GPC4O75487 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
GPC4O75487 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.08■□□□□ 0.8
GPC4O75487 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
GPC4O75487 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GPC4O75487 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
GPC4O75487 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
GPC4O75487 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GPC4O75487 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
GPC4O75487 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GPC4O75487 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.07■□□□□ 0.8
GPC4O75487 AL512625.2-201ENST00000417533 625 ntBASIC20.07■□□□□ 0.8
GPC4O75487 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GPC4O75487 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GPC4O75487 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.07■□□□□ 0.8
GPC4O75487 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.07■□□□□ 0.8
GPC4O75487 AC008694.1-202ENST00000636953 945 ntBASIC20.07■□□□□ 0.8
GPC4O75487 FP700111.2-201ENST00000619190 1892 ntBASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms