Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.29■□□□□ 0.68
CPNE3O75131 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE3O75131 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.28■□□□□ 0.68
CPNE3O75131 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.28■□□□□ 0.68
CPNE3O75131 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE3O75131 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE3O75131 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
CPNE3O75131 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE3O75131 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE3O75131 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE3O75131 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CPNE3O75131 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.28■□□□□ 0.68
CPNE3O75131 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE3O75131 AL359736.2-201ENST00000621992 437 ntBASIC19.28■□□□□ 0.68
CPNE3O75131 FAM197Y4-202ENST00000622692 608 ntBASIC19.28■□□□□ 0.68
CPNE3O75131 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CPNE3O75131 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE3O75131 Z98882.1-201ENST00000622160 2253 ntBASIC19.28■□□□□ 0.68
CPNE3O75131 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE3O75131 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CPNE3O75131 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE3O75131 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE3O75131 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CPNE3O75131 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.27■□□□□ 0.68
CPNE3O75131 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE3O75131 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE3O75131 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE3O75131 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.27■□□□□ 0.68
CPNE3O75131 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE3O75131 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE3O75131 POM121L13P-201ENST00000422362 380 ntBASIC19.27■□□□□ 0.68
CPNE3O75131 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CPNE3O75131 UBE2SP1-201ENST00000450587 669 ntBASIC19.27■□□□□ 0.68
CPNE3O75131 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE3O75131 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.27■□□□□ 0.68
CPNE3O75131 C1QBPP2-201ENST00000528754 825 ntBASIC19.27■□□□□ 0.68
CPNE3O75131 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.27■□□□□ 0.68
CPNE3O75131 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE3O75131 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CPNE3O75131 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CPNE3O75131 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.27■□□□□ 0.67
CPNE3O75131 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.26■□□□□ 0.67
CPNE3O75131 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CPNE3O75131 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE3O75131 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE3O75131 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE3O75131 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE3O75131 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE3O75131 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE3O75131 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE3O75131 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE3O75131 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE3O75131 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.26■□□□□ 0.67
CPNE3O75131 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.26■□□□□ 0.67
CPNE3O75131 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE3O75131 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.26■□□□□ 0.67
CPNE3O75131 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE3O75131 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CPNE3O75131 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.26■□□□□ 0.67
CPNE3O75131 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE3O75131 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE3O75131 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE3O75131 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE3O75131 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE3O75131 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.25■□□□□ 0.67
CPNE3O75131 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE3O75131 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CPNE3O75131 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE3O75131 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE3O75131 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE3O75131 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.25■□□□□ 0.67
CPNE3O75131 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE3O75131 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.25■□□□□ 0.67
CPNE3O75131 AL390719.1-204ENST00000412397 1219 ntBASIC19.25■□□□□ 0.67
CPNE3O75131 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CPNE3O75131 RPPH1-201ENST00000516869 333 ntBASIC19.25■□□□□ 0.67
CPNE3O75131 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CPNE3O75131 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.25■□□□□ 0.67
CPNE3O75131 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CPNE3O75131 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE3O75131 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE3O75131 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE3O75131 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE3O75131 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.25■□□□□ 0.67
CPNE3O75131 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CPNE3O75131 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE3O75131 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE3O75131 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.24■□□□□ 0.67
CPNE3O75131 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE3O75131 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE3O75131 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE3O75131 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE3O75131 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.24■□□□□ 0.67
CPNE3O75131 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE3O75131 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CPNE3O75131 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CPNE3O75131 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.24■□□□□ 0.67
CPNE3O75131 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.24■□□□□ 0.67
CPNE3O75131 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.24■□□□□ 0.67
CPNE3O75131 RPS2P4-201ENST00000476944 856 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms