Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMAD6O43541 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SMAD6O43541 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.37■□□□□ 0.85
SMAD6O43541 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.37■□□□□ 0.85
SMAD6O43541 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SMAD6O43541 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
SMAD6O43541 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
SMAD6O43541 RPS2P52-201ENST00000469610 820 ntBASIC20.37■□□□□ 0.85
SMAD6O43541 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.37■□□□□ 0.85
SMAD6O43541 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.37■□□□□ 0.85
SMAD6O43541 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.37■□□□□ 0.85
SMAD6O43541 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.37■□□□□ 0.85
SMAD6O43541 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.37■□□□□ 0.85
SMAD6O43541 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMAD6O43541 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.37■□□□□ 0.85
SMAD6O43541 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMAD6O43541 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SMAD6O43541 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SMAD6O43541 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMAD6O43541 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.37■□□□□ 0.85
SMAD6O43541 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMAD6O43541 AC073314.1-201ENST00000568729 2216 ntBASIC20.37■□□□□ 0.85
SMAD6O43541 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SMAD6O43541 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.37■□□□□ 0.85
SMAD6O43541 AC124283.5-201ENST00000624661 1809 ntBASIC20.37■□□□□ 0.85
SMAD6O43541 SMG8-203ENST00000578922 2178 ntBASIC20.36■□□□□ 0.85
SMAD6O43541 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMAD6O43541 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.36■□□□□ 0.85
SMAD6O43541 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.36■□□□□ 0.85
SMAD6O43541 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SMAD6O43541 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SMAD6O43541 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SMAD6O43541 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SMAD6O43541 GCSHP5-201ENST00000443090 522 ntBASIC20.36■□□□□ 0.85
SMAD6O43541 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.36■□□□□ 0.85
SMAD6O43541 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SMAD6O43541 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMAD6O43541 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.36■□□□□ 0.85
SMAD6O43541 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMAD6O43541 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMAD6O43541 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMAD6O43541 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMAD6O43541 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMAD6O43541 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.35■□□□□ 0.85
SMAD6O43541 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMAD6O43541 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
SMAD6O43541 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.35■□□□□ 0.85
SMAD6O43541 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMAD6O43541 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMAD6O43541 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.35■□□□□ 0.85
SMAD6O43541 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.35■□□□□ 0.85
SMAD6O43541 RN7SL471P-201ENST00000580476 299 ntBASIC20.35■□□□□ 0.85
SMAD6O43541 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
SMAD6O43541 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMAD6O43541 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMAD6O43541 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMAD6O43541 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.35■□□□□ 0.85
SMAD6O43541 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SMAD6O43541 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SMAD6O43541 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMAD6O43541 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
SMAD6O43541 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.34■□□□□ 0.85
SMAD6O43541 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SMAD6O43541 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SMAD6O43541 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMAD6O43541 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMAD6O43541 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.34■□□□□ 0.85
SMAD6O43541 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMAD6O43541 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SMAD6O43541 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMAD6O43541 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.34■□□□□ 0.85
SMAD6O43541 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SMAD6O43541 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.34■□□□□ 0.85
SMAD6O43541 AC142381.4-202ENST00000563973 229 ntBASIC20.34■□□□□ 0.85
SMAD6O43541 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.34■□□□□ 0.85
SMAD6O43541 AL031963.3-201ENST00000606441 850 ntBASIC20.34■□□□□ 0.85
SMAD6O43541 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMAD6O43541 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMAD6O43541 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMAD6O43541 KRT8P17-201ENST00000453110 1448 ntBASIC20.34■□□□□ 0.85
SMAD6O43541 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.34■□□□□ 0.85
SMAD6O43541 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMAD6O43541 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMAD6O43541 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMAD6O43541 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.33■□□□□ 0.85
SMAD6O43541 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMAD6O43541 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMAD6O43541 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMAD6O43541 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMAD6O43541 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SMAD6O43541 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMAD6O43541 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMAD6O43541 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.33■□□□□ 0.85
SMAD6O43541 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SMAD6O43541 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SMAD6O43541 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.33■□□□□ 0.85
SMAD6O43541 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMAD6O43541 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SMAD6O43541 AL158047.1-201ENST00000445918 881 ntBASIC20.33■□□□□ 0.85
SMAD6O43541 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms