Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
DUXBA0A1W2PPF3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.4■□□□□ 0.22
DUXBA0A1W2PPF3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DUXBA0A1W2PPF3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DUXBA0A1W2PPF3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DUXBA0A1W2PPF3 FAM21FP-204ENST00000608637 956 ntBASIC16.4■□□□□ 0.22
DUXBA0A1W2PPF3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.4■□□□□ 0.22
DUXBA0A1W2PPF3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.4■□□□□ 0.22
DUXBA0A1W2PPF3 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.4■□□□□ 0.22
DUXBA0A1W2PPF3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
DUXBA0A1W2PPF3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
DUXBA0A1W2PPF3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
DUXBA0A1W2PPF3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
DUXBA0A1W2PPF3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
DUXBA0A1W2PPF3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DUXBA0A1W2PPF3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DUXBA0A1W2PPF3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
DUXBA0A1W2PPF3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
DUXBA0A1W2PPF3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.39■□□□□ 0.21
DUXBA0A1W2PPF3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.39■□□□□ 0.21
DUXBA0A1W2PPF3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DUXBA0A1W2PPF3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DUXBA0A1W2PPF3 AC099791.1-201ENST00000416440 715 ntBASIC16.39■□□□□ 0.21
DUXBA0A1W2PPF3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.39■□□□□ 0.21
DUXBA0A1W2PPF3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DUXBA0A1W2PPF3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
DUXBA0A1W2PPF3 AC024257.2-201ENST00000549699 147 ntBASIC16.39■□□□□ 0.21
DUXBA0A1W2PPF3 AC012414.1-201ENST00000556676 535 ntBASIC16.39■□□□□ 0.21
DUXBA0A1W2PPF3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
DUXBA0A1W2PPF3 AL358852.1-201ENST00000623174 1268 ntBASIC16.39■□□□□ 0.21
DUXBA0A1W2PPF3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.39■□□□□ 0.21
DUXBA0A1W2PPF3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.39■□□□□ 0.21
DUXBA0A1W2PPF3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
DUXBA0A1W2PPF3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DUXBA0A1W2PPF3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DUXBA0A1W2PPF3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DUXBA0A1W2PPF3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.39■□□□□ 0.21
DUXBA0A1W2PPF3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DUXBA0A1W2PPF3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
DUXBA0A1W2PPF3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DUXBA0A1W2PPF3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
DUXBA0A1W2PPF3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DUXBA0A1W2PPF3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.38■□□□□ 0.21
DUXBA0A1W2PPF3 AC004408.2-201ENST00000623613 2777 ntBASIC16.38■□□□□ 0.21
DUXBA0A1W2PPF3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
DUXBA0A1W2PPF3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DUXBA0A1W2PPF3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.38■□□□□ 0.21
DUXBA0A1W2PPF3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DUXBA0A1W2PPF3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.38■□□□□ 0.21
DUXBA0A1W2PPF3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DUXBA0A1W2PPF3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.38■□□□□ 0.21
DUXBA0A1W2PPF3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.38■□□□□ 0.21
DUXBA0A1W2PPF3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.38■□□□□ 0.21
DUXBA0A1W2PPF3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
DUXBA0A1W2PPF3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DUXBA0A1W2PPF3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.38■□□□□ 0.21
DUXBA0A1W2PPF3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.38■□□□□ 0.21
DUXBA0A1W2PPF3 AC008764.7-201ENST00000593779 1081 ntBASIC16.38■□□□□ 0.21
DUXBA0A1W2PPF3 AL136162.1-201ENST00000607711 1078 ntBASIC16.38■□□□□ 0.21
DUXBA0A1W2PPF3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.38■□□□□ 0.21
DUXBA0A1W2PPF3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
DUXBA0A1W2PPF3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DUXBA0A1W2PPF3 AC135279.3-201ENST00000610945 1311 ntBASIC16.38■□□□□ 0.21
DUXBA0A1W2PPF3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.38■□□□□ 0.21
DUXBA0A1W2PPF3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DUXBA0A1W2PPF3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
DUXBA0A1W2PPF3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DUXBA0A1W2PPF3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.38■□□□□ 0.21
DUXBA0A1W2PPF3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DUXBA0A1W2PPF3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DUXBA0A1W2PPF3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
DUXBA0A1W2PPF3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.37■□□□□ 0.21
DUXBA0A1W2PPF3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DUXBA0A1W2PPF3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.37■□□□□ 0.21
DUXBA0A1W2PPF3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DUXBA0A1W2PPF3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.37■□□□□ 0.21
DUXBA0A1W2PPF3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DUXBA0A1W2PPF3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DUXBA0A1W2PPF3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.37■□□□□ 0.21
DUXBA0A1W2PPF3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.37■□□□□ 0.21
DUXBA0A1W2PPF3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.37■□□□□ 0.21
DUXBA0A1W2PPF3 TPRG1LP1-201ENST00000598702 760 ntBASIC16.37■□□□□ 0.21
DUXBA0A1W2PPF3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
DUXBA0A1W2PPF3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DUXBA0A1W2PPF3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
DUXBA0A1W2PPF3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DUXBA0A1W2PPF3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
DUXBA0A1W2PPF3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DUXBA0A1W2PPF3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DUXBA0A1W2PPF3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
DUXBA0A1W2PPF3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
DUXBA0A1W2PPF3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
DUXBA0A1W2PPF3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DUXBA0A1W2PPF3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DUXBA0A1W2PPF3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DUXBA0A1W2PPF3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DUXBA0A1W2PPF3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
DUXBA0A1W2PPF3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
DUXBA0A1W2PPF3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
DUXBA0A1W2PPF3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms