Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV25A0A0B4J276 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
TRAV25A0A0B4J276 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV25A0A0B4J276 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV25A0A0B4J276 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV25A0A0B4J276 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV25A0A0B4J276 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV25A0A0B4J276 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV25A0A0B4J276 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV25A0A0B4J276 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV25A0A0B4J276 KRT8P20-201ENST00000423953 1409 ntBASIC15.13■□□□□ 0.01
TRAV25A0A0B4J276 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV25A0A0B4J276 OR2A1-AS1-207ENST00000486094 819 ntBASIC15.13■□□□□ 0.01
TRAV25A0A0B4J276 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV25A0A0B4J276 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV25A0A0B4J276 AC005829.2-201ENST00000571422 1056 ntBASIC15.13■□□□□ 0.01
TRAV25A0A0B4J276 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV25A0A0B4J276 TBCB-214ENST00000629269 413 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV25A0A0B4J276 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV25A0A0B4J276 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV25A0A0B4J276 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV25A0A0B4J276 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV25A0A0B4J276 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV25A0A0B4J276 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV25A0A0B4J276 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
TRAV25A0A0B4J276 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV25A0A0B4J276 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV25A0A0B4J276 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRAV25A0A0B4J276 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV25A0A0B4J276 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV25A0A0B4J276 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV25A0A0B4J276 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV25A0A0B4J276 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV25A0A0B4J276 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV25A0A0B4J276 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV25A0A0B4J276 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV25A0A0B4J276 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRAV25A0A0B4J276 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV25A0A0B4J276 RER1-204ENST00000378518 522 ntTSL 3 BASIC15.12■□□□□ 0.01
TRAV25A0A0B4J276 GAS7-202ENST00000396115 929 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV25A0A0B4J276 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV25A0A0B4J276 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV25A0A0B4J276 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV25A0A0B4J276 UNC93B5-201ENST00000530315 699 ntBASIC15.12■□□□□ 0.01
TRAV25A0A0B4J276 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV25A0A0B4J276 AL031963.3-201ENST00000606441 850 ntBASIC15.12■□□□□ 0.01
TRAV25A0A0B4J276 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
TRAV25A0A0B4J276 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TRAV25A0A0B4J276 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV25A0A0B4J276 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV25A0A0B4J276 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV25A0A0B4J276 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRAV25A0A0B4J276 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV25A0A0B4J276 MOK-233ENST00000524214 1539 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV25A0A0B4J276 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV25A0A0B4J276 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV25A0A0B4J276 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV25A0A0B4J276 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV25A0A0B4J276 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV25A0A0B4J276 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV25A0A0B4J276 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV25A0A0B4J276 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRAV25A0A0B4J276 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC15.11■□□□□ 0.01
TRAV25A0A0B4J276 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV25A0A0B4J276 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAV25A0A0B4J276 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV25A0A0B4J276 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TRAV25A0A0B4J276 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV25A0A0B4J276 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV25A0A0B4J276 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRAV25A0A0B4J276 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC15.11■□□□□ 0.01
TRAV25A0A0B4J276 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAV25A0A0B4J276 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC15.11■□□□□ 0.01
TRAV25A0A0B4J276 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC15.11■□□□□ 0.01
TRAV25A0A0B4J276 ABHD17AP6-201ENST00000458502 1044 ntBASIC15.11■□□□□ 0.01
TRAV25A0A0B4J276 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC15.11■□□□□ 0.01
TRAV25A0A0B4J276 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TRAV25A0A0B4J276 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV25A0A0B4J276 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV25A0A0B4J276 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV25A0A0B4J276 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV25A0A0B4J276 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV25A0A0B4J276 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV25A0A0B4J276 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV25A0A0B4J276 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV25A0A0B4J276 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAV25A0A0B4J276 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV25A0A0B4J276 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV25A0A0B4J276 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV25A0A0B4J276 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
TRAV25A0A0B4J276 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV25A0A0B4J276 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRAV25A0A0B4J276 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV25A0A0B4J276 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV25A0A0B4J276 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms