Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 ZBTB14-201ENST00000357006 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LRCH3Q96II8 ARFIP1-201ENST00000353617 3111 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 SCMH1-204ENST00000361705 3115 ntTSL 5 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 ZSCAN26-206ENST00000619937 2729 ntAPPRIS ALT1 TSL 2 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 LRTOMT-201ENST00000289488 2332 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
LRCH3Q96II8 UGT2B28-202ENST00000511240 1525 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
LRCH3Q96II8 UGT2B7-205ENST00000622664 1532 ntTSL 5 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 TEX2-201ENST00000258991 5232 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
LRCH3Q96II8 RCAN1-207ENST00000481448 2816 ntTSL 5 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 TACC2-202ENST00000334433 9377 ntTSL 5 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 NPAP1P4-201ENST00000443325 3310 ntBASIC9.85□□□□□ -0.83
LRCH3Q96II8 NPHP1-207ENST00000445609 2513 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LRCH3Q96II8 AP004782.1-201ENST00000623990 3433 ntBASIC9.85□□□□□ -0.83
LRCH3Q96II8 MROH5-205ENST00000621837 4164 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 BUD13P1-201ENST00000603676 1489 ntBASIC9.85□□□□□ -0.83
LRCH3Q96II8 ADAM10-201ENST00000260408 11431 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LRCH3Q96II8 TRAPPC8-211ENST00000582539 4391 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
LRCH3Q96II8 BCOR-201ENST00000342274 6390 ntAPPRIS P3 TSL 5 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 AC074194.2-201ENST00000636429 2348 ntBASIC9.84□□□□□ -0.83
LRCH3Q96II8 FBXO8-201ENST00000393674 2577 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LRCH3Q96II8 PPIP5K1-202ENST00000348806 5433 ntAPPRIS ALT2 TSL 2 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 PHTF2-205ENST00000416283 5198 ntTSL 5 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 TKTL2-201ENST00000280605 2654 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 PFKFB1-202ENST00000375006 1929 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LRCH3Q96II8 TECPR2-203ENST00000558678 4281 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
LRCH3Q96II8 FZD6-201ENST00000358755 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LRCH3Q96II8 SVIL-203ENST00000375400 6729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
LRCH3Q96II8 LINC01694-202ENST00000441095 6721 ntTSL 3 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 CBWD1-204ENST00000377447 2513 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
LRCH3Q96II8 CHD3-201ENST00000330494 7328 ntAPPRIS P4 TSL 1 (best) BASIC9.84□□□□□ -0.83
LRCH3Q96II8 PAK3-212ENST00000519681 2638 ntTSL 5 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 CD44-206ENST00000415148 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
LRCH3Q96II8 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 HIST1H4F-201ENST00000244537 312 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
LRCH3Q96II8 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
LRCH3Q96II8 RN7SKP87-201ENST00000364096 301 ntBASIC9.84□□□□□ -0.83
LRCH3Q96II8 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 TRBV11-1-201ENST00000390367 364 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 RPL36A-202ENST00000392994 691 ntTSL 2 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 GACAT1-201ENST00000419650 577 ntTSL 4 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 RPL32-204ENST00000429711 2117 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LRCH3Q96II8 PDCL3P6-201ENST00000429744 706 ntBASIC9.84□□□□□ -0.83
LRCH3Q96II8 AL022313.3-201ENST00000433970 405 ntTSL 2 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 CFL1P8-201ENST00000436148 475 ntBASIC9.84□□□□□ -0.83
LRCH3Q96II8 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 AL353072.1-201ENST00000446021 442 ntBASIC9.84□□□□□ -0.83
LRCH3Q96II8 AL445220.1-201ENST00000456309 559 ntBASIC9.84□□□□□ -0.83
LRCH3Q96II8 RPL30P6-201ENST00000475925 342 ntBASIC9.84□□□□□ -0.83
LRCH3Q96II8 LINC02016-201ENST00000488425 927 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
LRCH3Q96II8 AC021006.1-201ENST00000489849 553 ntBASIC9.84□□□□□ -0.83
LRCH3Q96II8 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 AC008667.3-201ENST00000506892 553 ntTSL 4 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 AC109588.1-202ENST00000515720 880 ntTSL 3 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 COX6C-202ENST00000517682 429 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 AC114550.1-201ENST00000518846 573 ntTSL 4 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 OR4A17P-201ENST00000526032 904 ntBASIC9.84□□□□□ -0.83
LRCH3Q96II8 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 AL352979.3-201ENST00000553515 247 ntBASIC9.84□□□□□ -0.83
LRCH3Q96II8 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 ZNF585B-207ENST00000586320 403 ntTSL 3 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 CYP2B7P-203ENST00000599198 2956 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
LRCH3Q96II8 AC128687.1-201ENST00000605304 619 ntBASIC9.84□□□□□ -0.83
LRCH3Q96II8 NDUFA8P1-201ENST00000605525 367 ntBASIC9.84□□□□□ -0.83
LRCH3Q96II8 AC215522.1-201ENST00000615488 446 ntBASIC9.84□□□□□ -0.83
LRCH3Q96II8 AC007014.2-201ENST00000615581 479 ntBASIC9.84□□□□□ -0.83
LRCH3Q96II8 BX510359.8-201ENST00000617713 296 ntBASIC9.84□□□□□ -0.83
LRCH3Q96II8 OR1B1-201ENST00000623530 995 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 MAGOHB-211ENST00000625272 319 ntTSL 3 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 SLC14A1-202ENST00000402943 1390 ntTSL 2 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 ANO7-201ENST00000274979 4128 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
LRCH3Q96II8 RBM27-201ENST00000265271 6451 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LRCH3Q96II8 NLRP12-204ENST00000391773 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
LRCH3Q96II8 NCALD-212ENST00000519508 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LRCH3Q96II8 TNFAIP3-210ENST00000620204 3817 ntTSL 5 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 TCF4-211ENST00000561992 2184 ntTSL 2 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 WEE2-AS1-209ENST00000488785 2262 ntTSL 2 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 ENTPD1-210ENST00000543964 1579 ntTSL 2 BASIC9.84□□□□□ -0.83
LRCH3Q96II8 RASGRP1-213ENST00000561180 2707 ntTSL 2 BASIC9.84□□□□□ -0.84
LRCH3Q96II8 TIAL1-205ENST00000436547 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LRCH3Q96II8 EFCAB11-209ENST00000556005 1856 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LRCH3Q96II8 GRIA1-208ENST00000518142 2761 ntTSL 2 BASIC9.83□□□□□ -0.84
LRCH3Q96II8 PALLD-201ENST00000261509 5809 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
LRCH3Q96II8 CEACAM20-202ENST00000614577 1530 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LRCH3Q96II8 AL360294.1-201ENST00000640945 2438 ntBASIC9.83□□□□□ -0.84
LRCH3Q96II8 RFLNB-201ENST00000329099 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LRCH3Q96II8 AC016909.2-201ENST00000424510 1711 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LRCH3Q96II8 THBS3-203ENST00000457183 2727 ntTSL 2 BASIC9.83□□□□□ -0.84
LRCH3Q96II8 CSTL1-201ENST00000246020 510 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LRCH3Q96II8 FUNDC2P3-201ENST00000334716 533 ntBASIC9.83□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms