Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 MEFV-202ENST00000339854 2959 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
LRCH3Q96II8 RNU1-47P-201ENST00000362966 163 ntBASIC9.87□□□□□ -0.83
LRCH3Q96II8 ERCC5-202ENST00000375954 2986 ntTSL 5 BASIC9.87□□□□□ -0.83
LRCH3Q96II8 U3.17-201ENST00000390863 203 ntBASIC9.87□□□□□ -0.83
LRCH3Q96II8 RN7SKP142-201ENST00000411236 328 ntBASIC9.87□□□□□ -0.83
LRCH3Q96II8 UBTFL2-201ENST00000411859 1191 ntBASIC9.87□□□□□ -0.83
LRCH3Q96II8 AC007899.1-201ENST00000412776 775 ntBASIC9.87□□□□□ -0.83
LRCH3Q96II8 YWHAZP5-201ENST00000419975 730 ntBASIC9.87□□□□□ -0.83
LRCH3Q96II8 FNDC3CP-201ENST00000420795 1155 ntBASIC9.87□□□□□ -0.83
LRCH3Q96II8 AC012498.1-201ENST00000424037 437 ntBASIC9.87□□□□□ -0.83
LRCH3Q96II8 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC9.87□□□□□ -0.83
LRCH3Q96II8 ISCA1P1-201ENST00000426679 387 ntBASIC9.87□□□□□ -0.83
LRCH3Q96II8 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC9.87□□□□□ -0.83
LRCH3Q96II8 LINC01425-202ENST00000430060 760 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LRCH3Q96II8 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC9.87□□□□□ -0.83
LRCH3Q96II8 IGBP1P3-201ENST00000447449 1000 ntBASIC9.87□□□□□ -0.83
LRCH3Q96II8 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC9.87□□□□□ -0.83
LRCH3Q96II8 AL020994.1-201ENST00000454387 578 ntTSL 4 BASIC9.87□□□□□ -0.83
LRCH3Q96II8 PDCL3P4-201ENST00000489621 720 ntBASIC9.87□□□□□ -0.83
LRCH3Q96II8 OR9N1P-201ENST00000491296 333 ntBASIC9.87□□□□□ -0.83
LRCH3Q96II8 AC113367.1-201ENST00000498453 532 ntBASIC9.87□□□□□ -0.83
LRCH3Q96II8 AC096751.1-202ENST00000502691 1067 ntBASIC9.87□□□□□ -0.83
LRCH3Q96II8 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC9.87□□□□□ -0.83
LRCH3Q96II8 MTND2P33-201ENST00000506452 1031 ntBASIC9.87□□□□□ -0.83
LRCH3Q96II8 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC9.87□□□□□ -0.83
LRCH3Q96II8 GAPDHP31-201ENST00000509325 1014 ntBASIC9.87□□□□□ -0.83
LRCH3Q96II8 OR5H4P-201ENST00000510851 923 ntBASIC9.87□□□□□ -0.83
LRCH3Q96II8 AC063980.1-201ENST00000514282 414 ntTSL 3 BASIC9.87□□□□□ -0.83
LRCH3Q96II8 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC9.87□□□□□ -0.83
LRCH3Q96II8 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC9.87□□□□□ -0.83
LRCH3Q96II8 AC104211.2-201ENST00000521317 436 ntTSL 5 BASIC9.87□□□□□ -0.83
LRCH3Q96II8 C1GALT1P3-201ENST00000522049 819 ntBASIC9.87□□□□□ -0.83
LRCH3Q96II8 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC9.87□□□□□ -0.83
LRCH3Q96II8 AP003174.3-201ENST00000537926 516 ntBASIC9.87□□□□□ -0.83
LRCH3Q96II8 OR6C7P-201ENST00000547875 934 ntBASIC9.87□□□□□ -0.83
LRCH3Q96II8 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC9.87□□□□□ -0.83
LRCH3Q96II8 TPRKBP2-201ENST00000565969 475 ntBASIC9.87□□□□□ -0.83
LRCH3Q96II8 AC002519.2-203ENST00000567043 837 ntBASIC9.87□□□□□ -0.83
LRCH3Q96II8 GOSR1-212ENST00000581721 756 ntTSL 5 BASIC9.87□□□□□ -0.83
LRCH3Q96II8 AL391807.1-201ENST00000603261 712 ntTSL 5 BASIC9.87□□□□□ -0.83
LRCH3Q96II8 AP003121.1-201ENST00000609845 414 ntTSL 3 BASIC9.87□□□□□ -0.83
LRCH3Q96II8 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC9.87□□□□□ -0.83
LRCH3Q96II8 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC9.87□□□□□ -0.83
LRCH3Q96II8 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC9.87□□□□□ -0.83
LRCH3Q96II8 AC005077.4-201ENST00000421546 3495 ntBASIC9.87□□□□□ -0.83
LRCH3Q96II8 TANGO6-201ENST00000261778 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LRCH3Q96II8 IPP-202ENST00000396478 3113 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
LRCH3Q96II8 WDR47-205ENST00000400794 4134 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LRCH3Q96II8 NRXN3-202ENST00000335750 2764 ntTSL 5 BASIC9.87□□□□□ -0.83
LRCH3Q96II8 AL391380.1-201ENST00000439300 1432 ntBASIC9.87□□□□□ -0.83
LRCH3Q96II8 TNFRSF11B-201ENST00000297350 2402 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LRCH3Q96II8 HSP90AB1-203ENST00000371646 2572 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LRCH3Q96II8 AGXT2-204ENST00000510428 1561 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LRCH3Q96II8 KCNE1-208ENST00000611936 3222 ntAPPRIS P1 TSL 4 BASIC9.87□□□□□ -0.83
LRCH3Q96II8 LINC02204-201ENST00000630447 3206 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LRCH3Q96II8 CAB39L-201ENST00000347776 3361 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
LRCH3Q96II8 LINC00461-212ENST00000511014 3539 ntTSL 2 BASIC9.87□□□□□ -0.83
LRCH3Q96II8 NELL2-212ENST00000549027 3036 ntTSL 5 BASIC9.87□□□□□ -0.83
LRCH3Q96II8 MORC2-201ENST00000215862 4469 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LRCH3Q96II8 USP11-201ENST00000218348 3338 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
LRCH3Q96II8 NMNAT1-201ENST00000377205 3781 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LRCH3Q96II8 HMGCR-201ENST00000287936 4585 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LRCH3Q96II8 CABLES1-202ENST00000400473 1544 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
LRCH3Q96II8 ANKRD20A21P-202ENST00000623715 3588 ntBASIC9.86□□□□□ -0.83
LRCH3Q96II8 ZSCAN30-205ENST00000589178 3368 ntTSL 2 BASIC9.86□□□□□ -0.83
LRCH3Q96II8 ZNF423-203ENST00000561648 7907 ntAPPRIS P3 TSL 5 BASIC9.86□□□□□ -0.83
LRCH3Q96II8 STXBP6-207ENST00000550887 1311 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
LRCH3Q96II8 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC9.86□□□□□ -0.83
LRCH3Q96II8 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
LRCH3Q96II8 SCN10A-201ENST00000449082 6418 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LRCH3Q96II8 CTNND1-210ENST00000524630 6553 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
LRCH3Q96II8 LINC01531-202ENST00000536898 3312 ntTSL 2 BASIC9.86□□□□□ -0.83
LRCH3Q96II8 ZNF766-206ENST00000599581 2065 ntTSL 2 BASIC9.86□□□□□ -0.83
LRCH3Q96II8 PTGS1-205ENST00000540753 5375 ntTSL 2 BASIC9.86□□□□□ -0.83
LRCH3Q96II8 TBC1D13-201ENST00000223865 3378 ntTSL 2 BASIC9.86□□□□□ -0.83
LRCH3Q96II8 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
LRCH3Q96II8 PFDN5-203ENST00000351500 478 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LRCH3Q96II8 Y_RNA.162-201ENST00000363683 102 ntBASIC9.86□□□□□ -0.83
LRCH3Q96II8 CER1-201ENST00000380911 1215 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LRCH3Q96II8 STT3A-201ENST00000392708 4558 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LRCH3Q96II8 AC073610.3-201ENST00000398092 939 ntAPPRIS P1 TSL 3 BASIC9.86□□□□□ -0.83
LRCH3Q96II8 VDAC2P1-201ENST00000399358 958 ntBASIC9.86□□□□□ -0.83
LRCH3Q96II8 ICA1-205ENST00000401396 1742 ntTSL 5 BASIC9.86□□□□□ -0.83
LRCH3Q96II8 FTH1P10-201ENST00000401830 930 ntBASIC9.86□□□□□ -0.83
LRCH3Q96II8 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC9.86□□□□□ -0.83
LRCH3Q96II8 RPS21P1-201ENST00000434479 247 ntBASIC9.86□□□□□ -0.83
LRCH3Q96II8 HMGB1P31-201ENST00000437242 427 ntBASIC9.86□□□□□ -0.83
LRCH3Q96II8 NR1I3-211ENST00000442691 1114 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LRCH3Q96II8 RPL6P30-201ENST00000443382 862 ntBASIC9.86□□□□□ -0.83
LRCH3Q96II8 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC9.86□□□□□ -0.83
LRCH3Q96II8 USP9YP34-201ENST00000453983 808 ntBASIC9.86□□□□□ -0.83
LRCH3Q96II8 LINC00445-202ENST00000456848 643 ntTSL 3 BASIC9.86□□□□□ -0.83
LRCH3Q96II8 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC9.86□□□□□ -0.83
LRCH3Q96II8 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC9.86□□□□□ -0.83
LRCH3Q96II8 RN7SL757P-201ENST00000466709 301 ntBASIC9.86□□□□□ -0.83
LRCH3Q96II8 AC093010.2-201ENST00000481773 743 ntTSL 3 BASIC9.86□□□□□ -0.83
LRCH3Q96II8 AC004069.2-201ENST00000505438 1114 ntBASIC9.86□□□□□ -0.83
LRCH3Q96II8 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC9.86□□□□□ -0.83
LRCH3Q96II8 AC106872.4-201ENST00000510050 523 ntBASIC9.86□□□□□ -0.83
LRCH3Q96II8 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC9.86□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms