Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 SLC24A1-211ENST00000544319 3169 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
FOXG1P55316 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
FOXG1P55316 TRIM51FP-201ENST00000526452 1353 ntBASIC6.83□□□□□ -1.32
FOXG1P55316 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
FOXG1P55316 ZNF200-201ENST00000396868 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
FOXG1P55316 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
FOXG1P55316 AC005840.3-201ENST00000541888 1803 ntTSL 5 BASIC6.83□□□□□ -1.32
FOXG1P55316 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
FOXG1P55316 AL034397.3-202ENST00000621933 1815 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
FOXG1P55316 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
FOXG1P55316 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC6.83□□□□□ -1.32
FOXG1P55316 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
FOXG1P55316 DNAI1-201ENST00000242317 2504 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
FOXG1P55316 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
FOXG1P55316 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
FOXG1P55316 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC6.83□□□□□ -1.32
FOXG1P55316 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
FOXG1P55316 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
FOXG1P55316 NRG3-206ENST00000545131 2713 ntTSL 5 BASIC6.83□□□□□ -1.32
FOXG1P55316 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
FOXG1P55316 SNORA70I-201ENST00000384544 135 ntBASIC6.83□□□□□ -1.32
FOXG1P55316 MIR128-2-201ENST00000384893 84 ntBASIC6.83□□□□□ -1.32
FOXG1P55316 SRI-202ENST00000394641 653 ntTSL 2 BASIC6.83□□□□□ -1.32
FOXG1P55316 FTH1P26-201ENST00000406512 701 ntBASIC6.83□□□□□ -1.32
FOXG1P55316 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.83□□□□□ -1.32
FOXG1P55316 AC068481.1-201ENST00000415520 530 ntTSL 4 BASIC6.83□□□□□ -1.32
FOXG1P55316 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC6.83□□□□□ -1.32
FOXG1P55316 BMS1P12-201ENST00000428213 706 ntBASIC6.83□□□□□ -1.32
FOXG1P55316 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC6.83□□□□□ -1.32
FOXG1P55316 AC244021.2-201ENST00000445260 529 ntTSL 5 BASIC6.83□□□□□ -1.32
FOXG1P55316 YWHABP1-201ENST00000445359 727 ntBASIC6.83□□□□□ -1.32
FOXG1P55316 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC6.83□□□□□ -1.32
FOXG1P55316 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC6.83□□□□□ -1.32
FOXG1P55316 RN7SL338P-201ENST00000481467 293 ntBASIC6.83□□□□□ -1.32
FOXG1P55316 AC109811.2-201ENST00000509609 452 ntBASIC6.83□□□□□ -1.32
FOXG1P55316 AP000619.1-201ENST00000540293 1000 ntBASIC6.83□□□□□ -1.32
FOXG1P55316 AL355922.4-201ENST00000555642 449 ntTSL 3 BASIC6.83□□□□□ -1.32
FOXG1P55316 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC6.83□□□□□ -1.32
FOXG1P55316 AC009712.1-201ENST00000564938 316 ntBASIC6.83□□□□□ -1.32
FOXG1P55316 BOLA2P1-201ENST00000584794 232 ntBASIC6.83□□□□□ -1.32
FOXG1P55316 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.83□□□□□ -1.32
FOXG1P55316 AC008392.1-201ENST00000600941 437 ntTSL 2 BASIC6.83□□□□□ -1.32
FOXG1P55316 AL137190.1-201ENST00000603288 282 ntBASIC6.83□□□□□ -1.32
FOXG1P55316 AC016394.1-201ENST00000608444 833 ntBASIC6.83□□□□□ -1.32
FOXG1P55316 AC010320.5-201ENST00000619124 676 ntBASIC6.83□□□□□ -1.32
FOXG1P55316 AP003068.4-201ENST00000623192 802 ntBASIC6.83□□□□□ -1.32
FOXG1P55316 AC005609.2-201ENST00000623320 592 ntBASIC6.83□□□□□ -1.32
FOXG1P55316 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC6.83□□□□□ -1.32
FOXG1P55316 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC6.83□□□□□ -1.32
FOXG1P55316 LINC01103-201ENST00000430551 1457 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
FOXG1P55316 AC110926.1-201ENST00000412499 2825 ntBASIC6.83□□□□□ -1.32
FOXG1P55316 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
FOXG1P55316 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC6.83□□□□□ -1.32
FOXG1P55316 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
FOXG1P55316 EEF1A1P4-201ENST00000359165 1405 ntBASIC6.83□□□□□ -1.32
FOXG1P55316 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC6.83□□□□□ -1.32
FOXG1P55316 AC110998.1-201ENST00000519029 2053 ntBASIC6.83□□□□□ -1.32
FOXG1P55316 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
FOXG1P55316 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
FOXG1P55316 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
FOXG1P55316 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC6.83□□□□□ -1.32
FOXG1P55316 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC6.82□□□□□ -1.32
FOXG1P55316 AC123912.3-201ENST00000600907 1367 ntBASIC6.82□□□□□ -1.32
FOXG1P55316 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
FOXG1P55316 AC131392.2-201ENST00000505635 4332 ntBASIC6.82□□□□□ -1.32
FOXG1P55316 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
FOXG1P55316 EIF4BP4-201ENST00000441847 1780 ntBASIC6.82□□□□□ -1.32
FOXG1P55316 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
FOXG1P55316 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
FOXG1P55316 LINC02128-205ENST00000641755 1334 ntBASIC6.82□□□□□ -1.32
FOXG1P55316 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
FOXG1P55316 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
FOXG1P55316 ERBB3-213ENST00000549832 3289 ntTSL 2 BASIC6.82□□□□□ -1.32
FOXG1P55316 AC004862.1-209ENST00000437763 1678 ntTSL 5 BASIC6.82□□□□□ -1.32
FOXG1P55316 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC6.82□□□□□ -1.32
FOXG1P55316 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
FOXG1P55316 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
FOXG1P55316 AC240504.1-201ENST00000395709 845 ntBASIC6.82□□□□□ -1.32
FOXG1P55316 KRT18P52-201ENST00000404956 846 ntBASIC6.82□□□□□ -1.32
FOXG1P55316 AC074117.1-203ENST00000412749 399 ntTSL 3 BASIC6.82□□□□□ -1.32
FOXG1P55316 AL358942.1-201ENST00000418595 1178 ntBASIC6.82□□□□□ -1.32
FOXG1P55316 AC064875.1-203ENST00000422996 582 ntTSL 4 BASIC6.82□□□□□ -1.32
FOXG1P55316 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
FOXG1P55316 PRPS1P2-201ENST00000430496 937 ntBASIC6.82□□□□□ -1.32
FOXG1P55316 KATNBL1P2-201ENST00000433311 835 ntBASIC6.82□□□□□ -1.32
FOXG1P55316 CYP2C56P-201ENST00000440076 291 ntBASIC6.82□□□□□ -1.32
FOXG1P55316 AL137074.1-201ENST00000442640 465 ntBASIC6.82□□□□□ -1.32
FOXG1P55316 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC6.82□□□□□ -1.32
FOXG1P55316 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC6.82□□□□□ -1.32
FOXG1P55316 AL445187.1-201ENST00000502685 260 ntBASIC6.82□□□□□ -1.32
FOXG1P55316 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC6.82□□□□□ -1.32
FOXG1P55316 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC6.82□□□□□ -1.32
FOXG1P55316 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC6.82□□□□□ -1.32
FOXG1P55316 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
FOXG1P55316 FDPSP3-201ENST00000556903 1013 ntBASIC6.82□□□□□ -1.32
FOXG1P55316 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC6.82□□□□□ -1.32
FOXG1P55316 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
FOXG1P55316 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC6.82□□□□□ -1.32
FOXG1P55316 AL592504.1-201ENST00000605319 439 ntBASIC6.82□□□□□ -1.32
FOXG1P55316 AC087072.2-201ENST00000621060 682 ntBASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms