Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
P04436 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC7.17□□□□□ -1.26
P04436 AL603650.1-201ENST00000412680 240 ntBASIC7.17□□□□□ -1.26
P04436 HBBP1-201ENST00000433329 439 ntBASIC7.17□□□□□ -1.26
P04436 AC025262.1-201ENST00000434563 589 ntTSL 5 BASIC7.17□□□□□ -1.26
P04436 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC7.17□□□□□ -1.26
P04436 RN7SL706P-201ENST00000460079 292 ntBASIC7.17□□□□□ -1.26
P04436 RN7SL414P-201ENST00000469545 294 ntBASIC7.17□□□□□ -1.26
P04436 AC093821.1-201ENST00000503950 539 ntTSL 4 BASIC7.17□□□□□ -1.26
P04436 CKMT2-AS1-206ENST00000511495 585 ntTSL 4 BASIC7.17□□□□□ -1.26
P04436 AP003385.2-201ENST00000524910 973 ntBASIC7.17□□□□□ -1.26
P04436 AC090692.1-201ENST00000531569 541 ntTSL 3 BASIC7.17□□□□□ -1.26
P04436 VDAC2P2-201ENST00000544463 901 ntBASIC7.17□□□□□ -1.26
P04436 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC7.17□□□□□ -1.26
P04436 LINC02345-202ENST00000558081 1147 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
P04436 BMS1P8-201ENST00000565049 1178 ntBASIC7.17□□□□□ -1.26
P04436 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC7.17□□□□□ -1.26
P04436 AC090371.1-201ENST00000580071 558 ntTSL 4 BASIC7.17□□□□□ -1.26
P04436 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC7.17□□□□□ -1.26
P04436 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC7.17□□□□□ -1.26
P04436 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
P04436 AC008392.1-201ENST00000600941 437 ntTSL 2 BASIC7.17□□□□□ -1.26
P04436 OR6L2P-201ENST00000608207 925 ntBASIC7.17□□□□□ -1.26
P04436 SMIM11B-201ENST00000612624 1021 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
P04436 AC244196.3-201ENST00000614171 374 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
P04436 MIR6829-201ENST00000620375 67 ntBASIC7.17□□□□□ -1.26
P04436 CRNDE-214ENST00000637011 865 ntTSL 5 BASIC7.17□□□□□ -1.26
P04436 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC7.17□□□□□ -1.26
P04436 ZNF613-201ENST00000293471 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
P04436 BTK-201ENST00000308731 2579 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
P04436 HSP90AB2P-201ENST00000507090 2176 ntBASIC7.17□□□□□ -1.26
P04436 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
P04436 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC7.17□□□□□ -1.26
P04436 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
P04436 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
P04436 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.17□□□□□ -1.26
P04436 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
P04436 NCAPH-202ENST00000427946 2363 ntTSL 2 BASIC7.17□□□□□ -1.26
P04436 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
P04436 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
P04436 CCT6P2-201ENST00000507234 1593 ntBASIC7.16□□□□□ -1.26
P04436 NFIA-208ENST00000407417 2123 ntTSL 2 BASIC7.16□□□□□ -1.26
P04436 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
P04436 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
P04436 APBB2-224ENST00000513140 4166 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
P04436 RNA5SP483-201ENST00000363431 118 ntBASIC7.16□□□□□ -1.26
P04436 ST3GAL3-213ENST00000372365 673 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
P04436 SNORA10B-201ENST00000384458 133 ntBASIC7.16□□□□□ -1.26
P04436 H2AFZP3-201ENST00000394213 387 ntBASIC7.16□□□□□ -1.26
P04436 HNRNPCP2-201ENST00000399515 881 ntBASIC7.16□□□□□ -1.26
P04436 COX6A1P3-201ENST00000404167 293 ntBASIC7.16□□□□□ -1.26
P04436 AC074117.1-203ENST00000412749 399 ntTSL 3 BASIC7.16□□□□□ -1.26
P04436 RPL12P27-201ENST00000414870 496 ntBASIC7.16□□□□□ -1.26
P04436 PCBP1-AS1-212ENST00000418308 863 ntTSL 5 BASIC7.16□□□□□ -1.26
P04436 AC003071.2-201ENST00000423857 315 ntBASIC7.16□□□□□ -1.26
P04436 GAPDHP46-201ENST00000424043 994 ntBASIC7.16□□□□□ -1.26
P04436 BMS1P12-201ENST00000428213 706 ntBASIC7.16□□□□□ -1.26
P04436 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC7.16□□□□□ -1.26
P04436 LINC01821-202ENST00000438505 882 ntTSL 4 BASIC7.16□□□□□ -1.26
P04436 AL353754.1-201ENST00000440219 340 ntBASIC7.16□□□□□ -1.26
P04436 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC7.16□□□□□ -1.26
P04436 PRKG1-AS1-203ENST00000452247 886 ntTSL 5 BASIC7.16□□□□□ -1.26
P04436 AC234782.3-201ENST00000461229 433 ntBASIC7.16□□□□□ -1.26
P04436 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC7.16□□□□□ -1.26
P04436 AC090835.1-201ENST00000515189 1024 ntBASIC7.16□□□□□ -1.26
P04436 AC244090.2-201ENST00000567614 792 ntBASIC7.16□□□□□ -1.26
P04436 RN7SL473P-201ENST00000580341 299 ntBASIC7.16□□□□□ -1.26
P04436 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC7.16□□□□□ -1.26
P04436 NDUFA3P1-201ENST00000588007 252 ntBASIC7.16□□□□□ -1.26
P04436 AC006967.3-201ENST00000594086 1093 ntBASIC7.16□□□□□ -1.26
P04436 DARS-AS1-213ENST00000596410 741 ntTSL 5 BASIC7.16□□□□□ -1.26
P04436 AC243960.3-201ENST00000599316 580 ntTSL 4 BASIC7.16□□□□□ -1.26
P04436 AC129492.5-201ENST00000603489 315 ntBASIC7.16□□□□□ -1.26
P04436 AC012557.3-201ENST00000626439 255 ntBASIC7.16□□□□□ -1.26
P04436 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC7.16□□□□□ -1.26
P04436 AC010653.3-201ENST00000635332 232 ntBASIC7.16□□□□□ -1.26
P04436 BPTF-203ENST00000335221 2627 ntTSL 5 BASIC7.16□□□□□ -1.26
P04436 BIN2P2-201ENST00000503900 1303 ntBASIC7.16□□□□□ -1.26
P04436 EEF1A1P3-201ENST00000417549 1385 ntBASIC7.16□□□□□ -1.26
P04436 CPA4-201ENST00000222482 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
P04436 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
P04436 EYA4-213ENST00000531901 2892 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
P04436 CDYLP1-201ENST00000419017 1458 ntBASIC7.16□□□□□ -1.26
P04436 OSBPL6-202ENST00000315022 2999 ntTSL 2 BASIC7.16□□□□□ -1.26
P04436 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
P04436 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC7.16□□□□□ -1.26
P04436 RPS4X-201ENST00000316084 1526 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
P04436 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
P04436 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
P04436 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
P04436 FAM118B-201ENST00000360194 1616 ntAPPRIS ALT1 TSL 5 BASIC7.16□□□□□ -1.26
P04436 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC7.16□□□□□ -1.26
P04436 AC016027.2-201ENST00000441167 2493 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
P04436 TTC23-202ENST00000394129 2505 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
P04436 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.15□□□□□ -1.26
P04436 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
P04436 AC006269.1-201ENST00000636752 2789 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
P04436 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC7.15□□□□□ -1.26
P04436 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.15□□□□□ -1.26
P04436 ZNF567-204ENST00000588311 2042 ntTSL 2 BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms