Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
FOXG1P55316 LSM5-208ENST00000450169 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
FOXG1P55316 TLK2P2-201ENST00000414066 2240 ntBASIC6.88□□□□□ -1.31
FOXG1P55316 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
FOXG1P55316 FAM118B-201ENST00000360194 1616 ntAPPRIS ALT1 TSL 5 BASIC6.88□□□□□ -1.31
FOXG1P55316 AL022163.1-201ENST00000430261 1569 ntBASIC6.88□□□□□ -1.31
FOXG1P55316 ALG8-221ENST00000615266 1469 ntTSL 5 BASIC6.88□□□□□ -1.31
FOXG1P55316 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC6.88□□□□□ -1.31
FOXG1P55316 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
FOXG1P55316 RNA5SP389-201ENST00000362610 115 ntBASIC6.88□□□□□ -1.31
FOXG1P55316 RNA5SP226-201ENST00000362653 115 ntBASIC6.88□□□□□ -1.31
FOXG1P55316 RNA5SP161-201ENST00000363871 115 ntBASIC6.88□□□□□ -1.31
FOXG1P55316 RNA5SP149-201ENST00000364952 92 ntBASIC6.88□□□□□ -1.31
FOXG1P55316 SNORA7B-201ENST00000384360 139 ntBASIC6.88□□□□□ -1.31
FOXG1P55316 RN7SKP89-201ENST00000410774 242 ntBASIC6.88□□□□□ -1.31
FOXG1P55316 AL024497.1-201ENST00000412954 631 ntTSL 5 BASIC6.88□□□□□ -1.31
FOXG1P55316 LINC01392-201ENST00000419883 565 ntTSL 5 BASIC6.88□□□□□ -1.31
FOXG1P55316 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC6.88□□□□□ -1.31
FOXG1P55316 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC6.88□□□□□ -1.31
FOXG1P55316 AC007000.1-201ENST00000453064 794 ntBASIC6.88□□□□□ -1.31
FOXG1P55316 KIF3AP1-201ENST00000454055 611 ntBASIC6.88□□□□□ -1.31
FOXG1P55316 AC114801.1-201ENST00000512633 297 ntBASIC6.88□□□□□ -1.31
FOXG1P55316 AP000435.1-201ENST00000528539 496 ntBASIC6.88□□□□□ -1.31
FOXG1P55316 AC025419.1-202ENST00000535315 744 ntTSL 3 BASIC6.88□□□□□ -1.31
FOXG1P55316 NPIPP1-203ENST00000547107 1071 ntBASIC6.88□□□□□ -1.31
FOXG1P55316 TMEM106C-219ENST00000552546 742 ntTSL 4 BASIC6.88□□□□□ -1.31
FOXG1P55316 AC092868.1-201ENST00000557949 802 ntBASIC6.88□□□□□ -1.31
FOXG1P55316 RN7SL786P-201ENST00000579130 298 ntBASIC6.88□□□□□ -1.31
FOXG1P55316 AC090371.1-201ENST00000580071 558 ntTSL 4 BASIC6.88□□□□□ -1.31
FOXG1P55316 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC6.88□□□□□ -1.31
FOXG1P55316 AL161729.2-201ENST00000605700 456 ntBASIC6.88□□□□□ -1.31
FOXG1P55316 AC104117.5-201ENST00000606195 547 ntBASIC6.88□□□□□ -1.31
FOXG1P55316 AL590560.2-201ENST00000608430 732 ntBASIC6.88□□□□□ -1.31
FOXG1P55316 5S_rRNA.20-201ENST00000612104 118 ntBASIC6.88□□□□□ -1.31
FOXG1P55316 ACACA-232ENST00000614438 569 ntTSL 2 BASIC6.88□□□□□ -1.31
FOXG1P55316 AC124319.3-201ENST00000616832 526 ntBASIC6.88□□□□□ -1.31
FOXG1P55316 AC106875.2-201ENST00000617634 596 ntTSL 2 BASIC6.88□□□□□ -1.31
FOXG1P55316 AC087821.1-201ENST00000623639 567 ntBASIC6.88□□□□□ -1.31
FOXG1P55316 AC005841.2-201ENST00000637658 1167 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
FOXG1P55316 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC6.88□□□□□ -1.31
FOXG1P55316 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
FOXG1P55316 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
FOXG1P55316 AC022784.6-204ENST00000520390 3442 ntTSL 2 BASIC6.88□□□□□ -1.31
FOXG1P55316 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
FOXG1P55316 STX18-AS1-206ENST00000608184 3047 ntTSL 3 BASIC6.88□□□□□ -1.31
FOXG1P55316 AC016582.1-202ENST00000636341 2982 ntBASIC6.88□□□□□ -1.31
FOXG1P55316 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
FOXG1P55316 Z97832.2-201ENST00000605896 4261 ntBASIC6.88□□□□□ -1.31
FOXG1P55316 AC036108.4-201ENST00000611654 2516 ntBASIC6.88□□□□□ -1.31
FOXG1P55316 IST1-208ENST00000535424 4082 ntTSL 5 BASIC6.88□□□□□ -1.31
FOXG1P55316 SEMA3C-203ENST00000419255 2415 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
FOXG1P55316 CHODL-203ENST00000400127 2239 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
FOXG1P55316 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
FOXG1P55316 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
FOXG1P55316 ABHD3-205ENST00000578270 2080 ntTSL 5 BASIC6.88□□□□□ -1.31
FOXG1P55316 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
FOXG1P55316 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC6.88□□□□□ -1.31
FOXG1P55316 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
FOXG1P55316 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC6.87□□□□□ -1.31
FOXG1P55316 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
FOXG1P55316 AL445235.1-201ENST00000431202 1747 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
FOXG1P55316 ZSWIM5P3-201ENST00000511265 2743 ntBASIC6.87□□□□□ -1.31
FOXG1P55316 TDGF1P3-202ENST00000602699 2710 ntBASIC6.87□□□□□ -1.31
FOXG1P55316 AC016027.2-201ENST00000441167 2493 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
FOXG1P55316 RASSF5-209ENST00000636182 3427 ntTSL 5 BASIC6.87□□□□□ -1.31
FOXG1P55316 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
FOXG1P55316 IL15-207ENST00000514653 1388 ntTSL 5 BASIC6.87□□□□□ -1.31
FOXG1P55316 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
FOXG1P55316 RNA5SP185-201ENST00000390963 114 ntBASIC6.87□□□□□ -1.31
FOXG1P55316 MED15P8-201ENST00000411601 545 ntBASIC6.87□□□□□ -1.31
FOXG1P55316 RCAN3-203ENST00000412742 667 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
FOXG1P55316 AL451048.1-201ENST00000413328 217 ntTSL 3 BASIC6.87□□□□□ -1.31
FOXG1P55316 CRIP1P3-201ENST00000416794 220 ntBASIC6.87□□□□□ -1.31
FOXG1P55316 AC002553.1-201ENST00000442828 802 ntBASIC6.87□□□□□ -1.31
FOXG1P55316 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC6.87□□□□□ -1.31
FOXG1P55316 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
FOXG1P55316 ATP5G1P6-201ENST00000451206 412 ntBASIC6.87□□□□□ -1.31
FOXG1P55316 AC109454.1-201ENST00000471205 498 ntBASIC6.87□□□□□ -1.31
FOXG1P55316 FAM177A1P1-201ENST00000503598 473 ntBASIC6.87□□□□□ -1.31
FOXG1P55316 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC6.87□□□□□ -1.31
FOXG1P55316 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC6.87□□□□□ -1.31
FOXG1P55316 MS4A12-205ENST00000537076 1019 ntTSL 5 BASIC6.87□□□□□ -1.31
FOXG1P55316 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC6.87□□□□□ -1.31
FOXG1P55316 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC6.87□□□□□ -1.31
FOXG1P55316 OR4N1P-201ENST00000554847 949 ntBASIC6.87□□□□□ -1.31
FOXG1P55316 AC009118.1-201ENST00000566019 374 ntTSL 2 BASIC6.87□□□□□ -1.31
FOXG1P55316 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC6.87□□□□□ -1.31
FOXG1P55316 RPL35AP25-201ENST00000584631 330 ntBASIC6.87□□□□□ -1.31
FOXG1P55316 RN7SL760P-201ENST00000607344 270 ntBASIC6.87□□□□□ -1.31
FOXG1P55316 AC244669.1-201ENST00000616141 715 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
FOXG1P55316 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
FOXG1P55316 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC6.87□□□□□ -1.31
FOXG1P55316 ZNF19-210ENST00000567225 2838 ntTSL 3 BASIC6.87□□□□□ -1.31
FOXG1P55316 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
FOXG1P55316 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
FOXG1P55316 VIT-203ENST00000389975 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
FOXG1P55316 CTNNA2-217ENST00000540488 2792 ntTSL 5 BASIC6.87□□□□□ -1.31
FOXG1P55316 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
FOXG1P55316 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
FOXG1P55316 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms