Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
DNMT3BQ9UBC3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.15■□□□□ 0.98
DNMT3BQ9UBC3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
DNMT3BQ9UBC3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
DNMT3BQ9UBC3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
DNMT3BQ9UBC3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
DNMT3BQ9UBC3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
DNMT3BQ9UBC3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
DNMT3BQ9UBC3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
DNMT3BQ9UBC3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
DNMT3BQ9UBC3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.14■□□□□ 0.97
DNMT3BQ9UBC3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.14■□□□□ 0.97
DNMT3BQ9UBC3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
DNMT3BQ9UBC3 AC023632.3-201ENST00000521633 145 ntBASIC21.14■□□□□ 0.97
DNMT3BQ9UBC3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.14■□□□□ 0.97
DNMT3BQ9UBC3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.14■□□□□ 0.97
DNMT3BQ9UBC3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
DNMT3BQ9UBC3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.14■□□□□ 0.97
DNMT3BQ9UBC3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.14■□□□□ 0.97
DNMT3BQ9UBC3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
DNMT3BQ9UBC3 MIR2861-201ENST00000636310 90 ntBASIC21.14■□□□□ 0.97
DNMT3BQ9UBC3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.14■□□□□ 0.97
DNMT3BQ9UBC3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
DNMT3BQ9UBC3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
DNMT3BQ9UBC3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.14■□□□□ 0.97
DNMT3BQ9UBC3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DNMT3BQ9UBC3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DNMT3BQ9UBC3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DNMT3BQ9UBC3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.13■□□□□ 0.97
DNMT3BQ9UBC3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.13■□□□□ 0.97
DNMT3BQ9UBC3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DNMT3BQ9UBC3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
DNMT3BQ9UBC3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.13■□□□□ 0.97
DNMT3BQ9UBC3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DNMT3BQ9UBC3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
DNMT3BQ9UBC3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DNMT3BQ9UBC3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.13■□□□□ 0.97
DNMT3BQ9UBC3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DNMT3BQ9UBC3 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.13■□□□□ 0.97
DNMT3BQ9UBC3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.13■□□□□ 0.97
DNMT3BQ9UBC3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DNMT3BQ9UBC3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.13■□□□□ 0.97
DNMT3BQ9UBC3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
DNMT3BQ9UBC3 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.13■□□□□ 0.97
DNMT3BQ9UBC3 AL121829.2-201ENST00000620908 328 ntBASIC21.13■□□□□ 0.97
DNMT3BQ9UBC3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.13■□□□□ 0.97
DNMT3BQ9UBC3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DNMT3BQ9UBC3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DNMT3BQ9UBC3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
DNMT3BQ9UBC3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.13■□□□□ 0.97
DNMT3BQ9UBC3 AC124283.5-201ENST00000624661 1809 ntBASIC21.13■□□□□ 0.97
DNMT3BQ9UBC3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DNMT3BQ9UBC3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DNMT3BQ9UBC3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.12■□□□□ 0.97
DNMT3BQ9UBC3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.12■□□□□ 0.97
DNMT3BQ9UBC3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
DNMT3BQ9UBC3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DNMT3BQ9UBC3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DNMT3BQ9UBC3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
DNMT3BQ9UBC3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DNMT3BQ9UBC3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DNMT3BQ9UBC3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DNMT3BQ9UBC3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DNMT3BQ9UBC3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.12■□□□□ 0.97
DNMT3BQ9UBC3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.12■□□□□ 0.97
DNMT3BQ9UBC3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.12■□□□□ 0.97
DNMT3BQ9UBC3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.12■□□□□ 0.97
DNMT3BQ9UBC3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.12■□□□□ 0.97
DNMT3BQ9UBC3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.12■□□□□ 0.97
DNMT3BQ9UBC3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
DNMT3BQ9UBC3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DNMT3BQ9UBC3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
DNMT3BQ9UBC3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DNMT3BQ9UBC3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DNMT3BQ9UBC3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
DNMT3BQ9UBC3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DNMT3BQ9UBC3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
DNMT3BQ9UBC3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.11■□□□□ 0.97
DNMT3BQ9UBC3 AL355075.4-201ENST00000554988 638 ntBASIC21.11■□□□□ 0.97
DNMT3BQ9UBC3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
DNMT3BQ9UBC3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DNMT3BQ9UBC3 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.11■□□□□ 0.97
DNMT3BQ9UBC3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DNMT3BQ9UBC3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DNMT3BQ9UBC3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.11■□□□□ 0.97
DNMT3BQ9UBC3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DNMT3BQ9UBC3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.1■□□□□ 0.97
DNMT3BQ9UBC3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.1■□□□□ 0.97
DNMT3BQ9UBC3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.1■□□□□ 0.97
DNMT3BQ9UBC3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.1■□□□□ 0.97
DNMT3BQ9UBC3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
DNMT3BQ9UBC3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
DNMT3BQ9UBC3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.09■□□□□ 0.97
DNMT3BQ9UBC3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.09■□□□□ 0.97
DNMT3BQ9UBC3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DNMT3BQ9UBC3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DNMT3BQ9UBC3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
DNMT3BQ9UBC3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
DNMT3BQ9UBC3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DNMT3BQ9UBC3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms