Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VPS45Q9NRW7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
VPS45Q9NRW7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VPS45Q9NRW7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VPS45Q9NRW7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
VPS45Q9NRW7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
VPS45Q9NRW7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VPS45Q9NRW7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
VPS45Q9NRW7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.79■□□□□ 0.92
VPS45Q9NRW7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.79■□□□□ 0.92
VPS45Q9NRW7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.79■□□□□ 0.92
VPS45Q9NRW7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
VPS45Q9NRW7 REXO1L12P-201ENST00000622156 912 ntBASIC20.79■□□□□ 0.92
VPS45Q9NRW7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.79■□□□□ 0.92
VPS45Q9NRW7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.79■□□□□ 0.92
VPS45Q9NRW7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VPS45Q9NRW7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VPS45Q9NRW7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.79■□□□□ 0.92
VPS45Q9NRW7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VPS45Q9NRW7 AC073130.3-201ENST00000624389 2278 ntBASIC20.79■□□□□ 0.92
VPS45Q9NRW7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
VPS45Q9NRW7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VPS45Q9NRW7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VPS45Q9NRW7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VPS45Q9NRW7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.78■□□□□ 0.92
VPS45Q9NRW7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VPS45Q9NRW7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.78■□□□□ 0.92
VPS45Q9NRW7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.78■□□□□ 0.92
VPS45Q9NRW7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VPS45Q9NRW7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
VPS45Q9NRW7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.78■□□□□ 0.92
VPS45Q9NRW7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VPS45Q9NRW7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VPS45Q9NRW7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VPS45Q9NRW7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VPS45Q9NRW7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
VPS45Q9NRW7 AC211429.1-201ENST00000415277 523 ntBASIC20.78■□□□□ 0.92
VPS45Q9NRW7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.78■□□□□ 0.92
VPS45Q9NRW7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.78■□□□□ 0.92
VPS45Q9NRW7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.78■□□□□ 0.92
VPS45Q9NRW7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.78■□□□□ 0.92
VPS45Q9NRW7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.78■□□□□ 0.92
VPS45Q9NRW7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.78■□□□□ 0.92
VPS45Q9NRW7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
VPS45Q9NRW7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
VPS45Q9NRW7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VPS45Q9NRW7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
VPS45Q9NRW7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
VPS45Q9NRW7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
VPS45Q9NRW7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VPS45Q9NRW7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VPS45Q9NRW7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.77■□□□□ 0.92
VPS45Q9NRW7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VPS45Q9NRW7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.77■□□□□ 0.92
VPS45Q9NRW7 KRT17P3-201ENST00000420566 1262 ntBASIC20.77■□□□□ 0.92
VPS45Q9NRW7 CYP2T3P-201ENST00000601990 817 ntBASIC20.77■□□□□ 0.92
VPS45Q9NRW7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
VPS45Q9NRW7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
VPS45Q9NRW7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
VPS45Q9NRW7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.77■□□□□ 0.92
VPS45Q9NRW7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
VPS45Q9NRW7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
VPS45Q9NRW7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VPS45Q9NRW7 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.77■□□□□ 0.92
VPS45Q9NRW7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.77■□□□□ 0.92
VPS45Q9NRW7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
VPS45Q9NRW7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.77■□□□□ 0.91
VPS45Q9NRW7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.76■□□□□ 0.91
VPS45Q9NRW7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
VPS45Q9NRW7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VPS45Q9NRW7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VPS45Q9NRW7 FP700111.2-201ENST00000619190 1892 ntBASIC20.76■□□□□ 0.91
VPS45Q9NRW7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.76■□□□□ 0.91
VPS45Q9NRW7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
VPS45Q9NRW7 LINC01023-201ENST00000606054 436 ntBASIC20.76■□□□□ 0.91
VPS45Q9NRW7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.76■□□□□ 0.91
VPS45Q9NRW7 AC010331.1-201ENST00000611423 582 ntBASIC20.76■□□□□ 0.91
VPS45Q9NRW7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
VPS45Q9NRW7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
VPS45Q9NRW7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
VPS45Q9NRW7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VPS45Q9NRW7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
VPS45Q9NRW7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VPS45Q9NRW7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
VPS45Q9NRW7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
VPS45Q9NRW7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.76■□□□□ 0.91
VPS45Q9NRW7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.75■□□□□ 0.91
VPS45Q9NRW7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.75■□□□□ 0.91
VPS45Q9NRW7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VPS45Q9NRW7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
VPS45Q9NRW7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
VPS45Q9NRW7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
VPS45Q9NRW7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.75■□□□□ 0.91
VPS45Q9NRW7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
VPS45Q9NRW7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
VPS45Q9NRW7 SNORA78-201ENST00000459373 127 ntBASIC20.75■□□□□ 0.91
VPS45Q9NRW7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VPS45Q9NRW7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VPS45Q9NRW7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.75■□□□□ 0.91
VPS45Q9NRW7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms