Protein–RNA interactions for Protein: Q9NR81

ARHGEF3, Rho guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3Q9NR81 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ARHGEF3Q9NR81 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.28■■□□□ 1
ARHGEF3Q9NR81 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
ARHGEF3Q9NR81 Z98882.1-201ENST00000622160 2253 ntBASIC21.27■■□□□ 1
ARHGEF3Q9NR81 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.27■■□□□ 1
ARHGEF3Q9NR81 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
ARHGEF3Q9NR81 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
ARHGEF3Q9NR81 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
ARHGEF3Q9NR81 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.27■■□□□ 1
ARHGEF3Q9NR81 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.27■■□□□ 1
ARHGEF3Q9NR81 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ARHGEF3Q9NR81 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.27■■□□□ 1
ARHGEF3Q9NR81 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.27■■□□□ 1
ARHGEF3Q9NR81 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ARHGEF3Q9NR81 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.27■■□□□ 1
ARHGEF3Q9NR81 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.27■■□□□ 1
ARHGEF3Q9NR81 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.27■■□□□ 1
ARHGEF3Q9NR81 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.27■■□□□ 1
ARHGEF3Q9NR81 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.27■■□□□ 1
ARHGEF3Q9NR81 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.27■■□□□ 1
ARHGEF3Q9NR81 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.27■□□□□ 0.99
ARHGEF3Q9NR81 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
ARHGEF3Q9NR81 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.27■□□□□ 0.99
ARHGEF3Q9NR81 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ARHGEF3Q9NR81 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ARHGEF3Q9NR81 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
ARHGEF3Q9NR81 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.26■□□□□ 0.99
ARHGEF3Q9NR81 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ARHGEF3Q9NR81 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.26■□□□□ 0.99
ARHGEF3Q9NR81 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ARHGEF3Q9NR81 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.26■□□□□ 0.99
ARHGEF3Q9NR81 AC233702.5-201ENST00000584107 538 ntBASIC21.26■□□□□ 0.99
ARHGEF3Q9NR81 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.26■□□□□ 0.99
ARHGEF3Q9NR81 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ARHGEF3Q9NR81 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.26■□□□□ 0.99
ARHGEF3Q9NR81 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ARHGEF3Q9NR81 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.26■□□□□ 0.99
ARHGEF3Q9NR81 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ARHGEF3Q9NR81 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ARHGEF3Q9NR81 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ARHGEF3Q9NR81 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ARHGEF3Q9NR81 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ARHGEF3Q9NR81 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
ARHGEF3Q9NR81 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
ARHGEF3Q9NR81 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ARHGEF3Q9NR81 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.25■□□□□ 0.99
ARHGEF3Q9NR81 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.25■□□□□ 0.99
ARHGEF3Q9NR81 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.25■□□□□ 0.99
ARHGEF3Q9NR81 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.25■□□□□ 0.99
ARHGEF3Q9NR81 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.25■□□□□ 0.99
ARHGEF3Q9NR81 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ARHGEF3Q9NR81 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ARHGEF3Q9NR81 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
ARHGEF3Q9NR81 KRT17P2-201ENST00000300992 1314 ntBASIC21.25■□□□□ 0.99
ARHGEF3Q9NR81 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.25■□□□□ 0.99
ARHGEF3Q9NR81 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ARHGEF3Q9NR81 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ARHGEF3Q9NR81 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ARHGEF3Q9NR81 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
ARHGEF3Q9NR81 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
ARHGEF3Q9NR81 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ARHGEF3Q9NR81 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ARHGEF3Q9NR81 RPS2P55-201ENST00000397318 883 ntBASIC21.24■□□□□ 0.99
ARHGEF3Q9NR81 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
ARHGEF3Q9NR81 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.24■□□□□ 0.99
ARHGEF3Q9NR81 TSPY7P-201ENST00000431358 1114 ntBASIC21.24■□□□□ 0.99
ARHGEF3Q9NR81 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.24■□□□□ 0.99
ARHGEF3Q9NR81 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ARHGEF3Q9NR81 AC107956.1-201ENST00000494359 873 ntBASIC21.24■□□□□ 0.99
ARHGEF3Q9NR81 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ARHGEF3Q9NR81 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.24■□□□□ 0.99
ARHGEF3Q9NR81 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ARHGEF3Q9NR81 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ARHGEF3Q9NR81 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
ARHGEF3Q9NR81 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
ARHGEF3Q9NR81 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.24■□□□□ 0.99
ARHGEF3Q9NR81 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.24■□□□□ 0.99
ARHGEF3Q9NR81 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.24■□□□□ 0.99
ARHGEF3Q9NR81 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.24■□□□□ 0.99
ARHGEF3Q9NR81 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
ARHGEF3Q9NR81 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ARHGEF3Q9NR81 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ARHGEF3Q9NR81 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ARHGEF3Q9NR81 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.23■□□□□ 0.99
ARHGEF3Q9NR81 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
ARHGEF3Q9NR81 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ARHGEF3Q9NR81 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ARHGEF3Q9NR81 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.23■□□□□ 0.99
ARHGEF3Q9NR81 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
ARHGEF3Q9NR81 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ARHGEF3Q9NR81 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ARHGEF3Q9NR81 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
ARHGEF3Q9NR81 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.23■□□□□ 0.99
ARHGEF3Q9NR81 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ARHGEF3Q9NR81 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.23■□□□□ 0.99
ARHGEF3Q9NR81 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.23■□□□□ 0.99
ARHGEF3Q9NR81 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.23■□□□□ 0.99
ARHGEF3Q9NR81 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.23■□□□□ 0.99
ARHGEF3Q9NR81 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
ARHGEF3Q9NR81 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms