Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PIF1Q9H611 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.2■□□□□ 0.66
PIF1Q9H611 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PIF1Q9H611 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PIF1Q9H611 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PIF1Q9H611 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PIF1Q9H611 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PIF1Q9H611 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
PIF1Q9H611 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PIF1Q9H611 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.19■□□□□ 0.66
PIF1Q9H611 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.19■□□□□ 0.66
PIF1Q9H611 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PIF1Q9H611 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PIF1Q9H611 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PIF1Q9H611 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PIF1Q9H611 AC245052.3-201ENST00000450182 901 ntBASIC19.19■□□□□ 0.66
PIF1Q9H611 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PIF1Q9H611 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.19■□□□□ 0.66
PIF1Q9H611 AC079140.4-201ENST00000507448 529 ntBASIC19.19■□□□□ 0.66
PIF1Q9H611 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.19■□□□□ 0.66
PIF1Q9H611 MIR2861-201ENST00000636310 90 ntBASIC19.19■□□□□ 0.66
PIF1Q9H611 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PIF1Q9H611 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
PIF1Q9H611 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PIF1Q9H611 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PIF1Q9H611 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PIF1Q9H611 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PIF1Q9H611 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PIF1Q9H611 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.19■□□□□ 0.66
PIF1Q9H611 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.19■□□□□ 0.66
PIF1Q9H611 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PIF1Q9H611 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PIF1Q9H611 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.19■□□□□ 0.66
PIF1Q9H611 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.18■□□□□ 0.66
PIF1Q9H611 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PIF1Q9H611 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PIF1Q9H611 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PIF1Q9H611 AC098818.2-201ENST00000564925 2320 ntBASIC19.18■□□□□ 0.66
PIF1Q9H611 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PIF1Q9H611 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PIF1Q9H611 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
PIF1Q9H611 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PIF1Q9H611 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.18■□□□□ 0.66
PIF1Q9H611 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PIF1Q9H611 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.18■□□□□ 0.66
PIF1Q9H611 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PIF1Q9H611 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.18■□□□□ 0.66
PIF1Q9H611 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PIF1Q9H611 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
PIF1Q9H611 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.18■□□□□ 0.66
PIF1Q9H611 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
PIF1Q9H611 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.18■□□□□ 0.66
PIF1Q9H611 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PIF1Q9H611 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PIF1Q9H611 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.17■□□□□ 0.66
PIF1Q9H611 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PIF1Q9H611 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PIF1Q9H611 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PIF1Q9H611 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PIF1Q9H611 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PIF1Q9H611 KRT87P-202ENST00000534226 1464 ntBASIC19.17■□□□□ 0.66
PIF1Q9H611 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PIF1Q9H611 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.17■□□□□ 0.66
PIF1Q9H611 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.17■□□□□ 0.66
PIF1Q9H611 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.17■□□□□ 0.66
PIF1Q9H611 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PIF1Q9H611 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PIF1Q9H611 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PIF1Q9H611 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
PIF1Q9H611 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PIF1Q9H611 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PIF1Q9H611 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.17■□□□□ 0.66
PIF1Q9H611 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.17■□□□□ 0.66
PIF1Q9H611 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PIF1Q9H611 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.17■□□□□ 0.66
PIF1Q9H611 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.16■□□□□ 0.66
PIF1Q9H611 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
PIF1Q9H611 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.16■□□□□ 0.66
PIF1Q9H611 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PIF1Q9H611 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
PIF1Q9H611 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PIF1Q9H611 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PIF1Q9H611 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.16■□□□□ 0.66
PIF1Q9H611 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.16■□□□□ 0.66
PIF1Q9H611 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PIF1Q9H611 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.16■□□□□ 0.66
PIF1Q9H611 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.16■□□□□ 0.66
PIF1Q9H611 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PIF1Q9H611 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PIF1Q9H611 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PIF1Q9H611 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PIF1Q9H611 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PIF1Q9H611 AC116050.2-201ENST00000612102 1779 ntBASIC19.16■□□□□ 0.66
PIF1Q9H611 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PIF1Q9H611 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
PIF1Q9H611 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
PIF1Q9H611 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PIF1Q9H611 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PIF1Q9H611 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PIF1Q9H611 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms