Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.9■■□□□ 1.1
CDT1Q9H211 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDT1Q9H211 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDT1Q9H211 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDT1Q9H211 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.9■■□□□ 1.1
CDT1Q9H211 AC069544.1-201ENST00000609399 999 ntBASIC21.9■■□□□ 1.1
CDT1Q9H211 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.9■■□□□ 1.1
CDT1Q9H211 AC120498.8-201ENST00000614275 531 ntBASIC21.9■■□□□ 1.1
CDT1Q9H211 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDT1Q9H211 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.9■■□□□ 1.1
CDT1Q9H211 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.9■■□□□ 1.1
CDT1Q9H211 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDT1Q9H211 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CDT1Q9H211 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDT1Q9H211 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDT1Q9H211 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CDT1Q9H211 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDT1Q9H211 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.89■■□□□ 1.1
CDT1Q9H211 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDT1Q9H211 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDT1Q9H211 KRT17P3-201ENST00000420566 1262 ntBASIC21.89■■□□□ 1.09
CDT1Q9H211 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.89■■□□□ 1.09
CDT1Q9H211 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.89■■□□□ 1.09
CDT1Q9H211 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.89■■□□□ 1.09
CDT1Q9H211 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.89■■□□□ 1.09
CDT1Q9H211 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDT1Q9H211 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDT1Q9H211 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDT1Q9H211 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
CDT1Q9H211 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDT1Q9H211 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
CDT1Q9H211 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDT1Q9H211 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
CDT1Q9H211 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDT1Q9H211 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.88■■□□□ 1.09
CDT1Q9H211 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.88■■□□□ 1.09
CDT1Q9H211 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDT1Q9H211 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.88■■□□□ 1.09
CDT1Q9H211 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDT1Q9H211 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CDT1Q9H211 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDT1Q9H211 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDT1Q9H211 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
CDT1Q9H211 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.87■■□□□ 1.09
CDT1Q9H211 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.87■■□□□ 1.09
CDT1Q9H211 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.87■■□□□ 1.09
CDT1Q9H211 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDT1Q9H211 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CDT1Q9H211 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.87■■□□□ 1.09
CDT1Q9H211 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CDT1Q9H211 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
CDT1Q9H211 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.87■■□□□ 1.09
CDT1Q9H211 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDT1Q9H211 AL031963.3-201ENST00000606441 850 ntBASIC21.87■■□□□ 1.09
CDT1Q9H211 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
CDT1Q9H211 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDT1Q9H211 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDT1Q9H211 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDT1Q9H211 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDT1Q9H211 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.86■■□□□ 1.09
CDT1Q9H211 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CDT1Q9H211 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDT1Q9H211 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.86■■□□□ 1.09
CDT1Q9H211 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDT1Q9H211 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDT1Q9H211 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.86■■□□□ 1.09
CDT1Q9H211 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDT1Q9H211 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.86■■□□□ 1.09
CDT1Q9H211 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.86■■□□□ 1.09
CDT1Q9H211 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDT1Q9H211 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDT1Q9H211 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDT1Q9H211 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CDT1Q9H211 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.86■■□□□ 1.09
CDT1Q9H211 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
CDT1Q9H211 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.86■■□□□ 1.09
CDT1Q9H211 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CDT1Q9H211 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.86■■□□□ 1.09
CDT1Q9H211 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CDT1Q9H211 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
CDT1Q9H211 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CDT1Q9H211 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.86■■□□□ 1.09
CDT1Q9H211 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CDT1Q9H211 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CDT1Q9H211 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.85■■□□□ 1.09
CDT1Q9H211 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.85■■□□□ 1.09
CDT1Q9H211 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CDT1Q9H211 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDT1Q9H211 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CDT1Q9H211 GCSHP5-201ENST00000443090 522 ntBASIC21.85■■□□□ 1.09
CDT1Q9H211 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CDT1Q9H211 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDT1Q9H211 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDT1Q9H211 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDT1Q9H211 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.84■■□□□ 1.09
CDT1Q9H211 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
CDT1Q9H211 KRT8P20-201ENST00000423953 1409 ntBASIC21.84■■□□□ 1.09
CDT1Q9H211 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
CDT1Q9H211 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
CDT1Q9H211 RPS2P52-201ENST00000469610 820 ntBASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms