Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS1Q99742 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS1Q99742 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS1Q99742 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS1Q99742 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS1Q99742 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
NPAS1Q99742 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS1Q99742 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
NPAS1Q99742 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS1Q99742 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.36■□□□□ 0.53
NPAS1Q99742 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS1Q99742 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
NPAS1Q99742 MIR4758-201ENST00000577688 71 ntBASIC18.36■□□□□ 0.53
NPAS1Q99742 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
NPAS1Q99742 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NPAS1Q99742 AC083880.1-201ENST00000608266 535 ntBASIC18.36■□□□□ 0.53
NPAS1Q99742 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
NPAS1Q99742 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS1Q99742 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS1Q99742 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS1Q99742 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS1Q99742 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS1Q99742 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS1Q99742 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS1Q99742 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS1Q99742 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.35■□□□□ 0.53
NPAS1Q99742 PGM5P4-201ENST00000421970 445 ntBASIC18.35■□□□□ 0.53
NPAS1Q99742 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS1Q99742 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.35■□□□□ 0.53
NPAS1Q99742 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.35■□□□□ 0.53
NPAS1Q99742 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.35■□□□□ 0.53
NPAS1Q99742 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.35■□□□□ 0.53
NPAS1Q99742 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS1Q99742 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NPAS1Q99742 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS1Q99742 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS1Q99742 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS1Q99742 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS1Q99742 SMG8-203ENST00000578922 2178 ntBASIC18.35■□□□□ 0.53
NPAS1Q99742 AL512408.1-201ENST00000569378 2000 ntBASIC18.35■□□□□ 0.53
NPAS1Q99742 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS1Q99742 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.35■□□□□ 0.53
NPAS1Q99742 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS1Q99742 AC092720.2-201ENST00000602388 1665 ntBASIC18.34■□□□□ 0.53
NPAS1Q99742 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS1Q99742 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.34■□□□□ 0.53
NPAS1Q99742 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.34■□□□□ 0.53
NPAS1Q99742 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS1Q99742 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.34■□□□□ 0.53
NPAS1Q99742 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS1Q99742 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
NPAS1Q99742 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS1Q99742 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS1Q99742 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS1Q99742 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS1Q99742 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NPAS1Q99742 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
NPAS1Q99742 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NPAS1Q99742 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
NPAS1Q99742 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.34■□□□□ 0.53
NPAS1Q99742 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.34■□□□□ 0.53
NPAS1Q99742 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS1Q99742 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
NPAS1Q99742 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
NPAS1Q99742 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.34■□□□□ 0.53
NPAS1Q99742 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.34■□□□□ 0.53
NPAS1Q99742 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.34■□□□□ 0.53
NPAS1Q99742 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS1Q99742 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS1Q99742 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.34■□□□□ 0.53
NPAS1Q99742 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NPAS1Q99742 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.33■□□□□ 0.53
NPAS1Q99742 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NPAS1Q99742 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
NPAS1Q99742 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
NPAS1Q99742 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
NPAS1Q99742 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NPAS1Q99742 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.33■□□□□ 0.53
NPAS1Q99742 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NPAS1Q99742 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NPAS1Q99742 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.33■□□□□ 0.53
NPAS1Q99742 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPAS1Q99742 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.33■□□□□ 0.52
NPAS1Q99742 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.33■□□□□ 0.52
NPAS1Q99742 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.33■□□□□ 0.52
NPAS1Q99742 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPAS1Q99742 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NPAS1Q99742 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.33■□□□□ 0.52
NPAS1Q99742 C2orf69P4-201ENST00000565394 541 ntBASIC18.33■□□□□ 0.52
NPAS1Q99742 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NPAS1Q99742 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPAS1Q99742 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
NPAS1Q99742 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.33■□□□□ 0.52
NPAS1Q99742 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.33■□□□□ 0.52
NPAS1Q99742 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPAS1Q99742 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPAS1Q99742 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
NPAS1Q99742 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPAS1Q99742 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.33■□□□□ 0.52
NPAS1Q99742 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms