Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC138Q96M89 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC138Q96M89 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CCDC138Q96M89 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC138Q96M89 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
CCDC138Q96M89 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC138Q96M89 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC138Q96M89 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CCDC138Q96M89 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC138Q96M89 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CCDC138Q96M89 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC138Q96M89 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC138Q96M89 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC138Q96M89 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC138Q96M89 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC138Q96M89 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC138Q96M89 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CCDC138Q96M89 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC138Q96M89 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
CCDC138Q96M89 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC138Q96M89 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC138Q96M89 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC138Q96M89 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC138Q96M89 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC138Q96M89 PGM5P4-201ENST00000421970 445 ntBASIC19.87■□□□□ 0.77
CCDC138Q96M89 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC138Q96M89 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC138Q96M89 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.87■□□□□ 0.77
CCDC138Q96M89 AC069236.1-201ENST00000604339 616 ntBASIC19.87■□□□□ 0.77
CCDC138Q96M89 AC100791.3-201ENST00000617619 330 ntBASIC19.87■□□□□ 0.77
CCDC138Q96M89 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC138Q96M89 AC008694.1-202ENST00000636953 945 ntBASIC19.87■□□□□ 0.77
CCDC138Q96M89 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC138Q96M89 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC138Q96M89 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC138Q96M89 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CCDC138Q96M89 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC138Q96M89 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC138Q96M89 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
CCDC138Q96M89 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC138Q96M89 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
CCDC138Q96M89 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC138Q96M89 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC138Q96M89 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC138Q96M89 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
CCDC138Q96M89 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC138Q96M89 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CCDC138Q96M89 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC138Q96M89 CYP2T1P-201ENST00000432607 1285 ntBASIC19.86■□□□□ 0.77
CCDC138Q96M89 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC138Q96M89 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC138Q96M89 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC138Q96M89 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC138Q96M89 AC073111.5-205ENST00000641717 521 ntBASIC19.86■□□□□ 0.77
CCDC138Q96M89 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC138Q96M89 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC138Q96M89 AP005212.1-201ENST00000581547 1997 ntBASIC19.86■□□□□ 0.77
CCDC138Q96M89 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC138Q96M89 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CCDC138Q96M89 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC138Q96M89 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC138Q96M89 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC138Q96M89 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC138Q96M89 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC138Q96M89 AIRN-201ENST00000601203 4374 ntBASIC19.85■□□□□ 0.77
CCDC138Q96M89 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC138Q96M89 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CCDC138Q96M89 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC138Q96M89 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CCDC138Q96M89 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC138Q96M89 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC138Q96M89 AC005181.1-201ENST00000604782 1256 ntBASIC19.85■□□□□ 0.77
CCDC138Q96M89 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC138Q96M89 OR10C1-204ENST00000622521 1039 ntBASIC19.85■□□□□ 0.77
CCDC138Q96M89 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC138Q96M89 GABARAPL3-202ENST00000624044 1851 ntBASIC19.85■□□□□ 0.77
CCDC138Q96M89 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC138Q96M89 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC138Q96M89 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC138Q96M89 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC138Q96M89 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC138Q96M89 CYP21A1P-202ENST00000354927 1481 ntBASIC19.85■□□□□ 0.77
CCDC138Q96M89 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC138Q96M89 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC138Q96M89 KRT8P36-201ENST00000489121 1440 ntBASIC19.85■□□□□ 0.77
CCDC138Q96M89 AC087633.2-202ENST00000565166 1439 ntBASIC19.85■□□□□ 0.77
CCDC138Q96M89 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC138Q96M89 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC138Q96M89 AC073314.1-201ENST00000568729 2216 ntBASIC19.84■□□□□ 0.77
CCDC138Q96M89 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC138Q96M89 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC138Q96M89 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CCDC138Q96M89 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC138Q96M89 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC138Q96M89 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC138Q96M89 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC138Q96M89 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC138Q96M89 CDCA4P2-201ENST00000441182 718 ntBASIC19.84■□□□□ 0.77
CCDC138Q96M89 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC138Q96M89 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms