Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 KRT18P29-201ENST00000397031 1267 ntBASIC21.25■□□□□ 0.99
SMARCD1Q96GM5 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMARCD1Q96GM5 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.25■□□□□ 0.99
SMARCD1Q96GM5 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SMARCD1Q96GM5 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SMARCD1Q96GM5 AC008687.6-201ENST00000596318 630 ntBASIC21.25■□□□□ 0.99
SMARCD1Q96GM5 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMARCD1Q96GM5 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.25■□□□□ 0.99
SMARCD1Q96GM5 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SMARCD1Q96GM5 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMARCD1Q96GM5 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMARCD1Q96GM5 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.25■□□□□ 0.99
SMARCD1Q96GM5 DPP3P2-201ENST00000416030 1696 ntBASIC21.24■□□□□ 0.99
SMARCD1Q96GM5 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMARCD1Q96GM5 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SMARCD1Q96GM5 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMARCD1Q96GM5 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.24■□□□□ 0.99
SMARCD1Q96GM5 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
SMARCD1Q96GM5 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.24■□□□□ 0.99
SMARCD1Q96GM5 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.24■□□□□ 0.99
SMARCD1Q96GM5 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.24■□□□□ 0.99
SMARCD1Q96GM5 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.24■□□□□ 0.99
SMARCD1Q96GM5 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SMARCD1Q96GM5 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMARCD1Q96GM5 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.24■□□□□ 0.99
SMARCD1Q96GM5 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.24■□□□□ 0.99
SMARCD1Q96GM5 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.24■□□□□ 0.99
SMARCD1Q96GM5 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMARCD1Q96GM5 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SMARCD1Q96GM5 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMARCD1Q96GM5 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMARCD1Q96GM5 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMARCD1Q96GM5 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.23■□□□□ 0.99
SMARCD1Q96GM5 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.23■□□□□ 0.99
SMARCD1Q96GM5 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.23■□□□□ 0.99
SMARCD1Q96GM5 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMARCD1Q96GM5 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMARCD1Q96GM5 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.23■□□□□ 0.99
SMARCD1Q96GM5 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMARCD1Q96GM5 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMARCD1Q96GM5 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMARCD1Q96GM5 POM121L13P-201ENST00000422362 380 ntBASIC21.23■□□□□ 0.99
SMARCD1Q96GM5 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.23■□□□□ 0.99
SMARCD1Q96GM5 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.23■□□□□ 0.99
SMARCD1Q96GM5 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.23■□□□□ 0.99
SMARCD1Q96GM5 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.23■□□□□ 0.99
SMARCD1Q96GM5 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
SMARCD1Q96GM5 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.23■□□□□ 0.99
SMARCD1Q96GM5 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMARCD1Q96GM5 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMARCD1Q96GM5 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.23■□□□□ 0.99
SMARCD1Q96GM5 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.22■□□□□ 0.99
SMARCD1Q96GM5 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.22■□□□□ 0.99
SMARCD1Q96GM5 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMARCD1Q96GM5 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMARCD1Q96GM5 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMARCD1Q96GM5 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMARCD1Q96GM5 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SMARCD1Q96GM5 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMARCD1Q96GM5 HLA-G-202ENST00000376815 851 ntBASIC21.22■□□□□ 0.99
SMARCD1Q96GM5 HLA-G-203ENST00000376818 1127 ntBASIC21.22■□□□□ 0.99
SMARCD1Q96GM5 KRT17P3-201ENST00000420566 1262 ntBASIC21.22■□□□□ 0.99
SMARCD1Q96GM5 AC128676.1-201ENST00000454392 318 ntBASIC21.22■□□□□ 0.99
SMARCD1Q96GM5 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.22■□□□□ 0.99
SMARCD1Q96GM5 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMARCD1Q96GM5 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.22■□□□□ 0.99
SMARCD1Q96GM5 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.22■□□□□ 0.99
SMARCD1Q96GM5 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SMARCD1Q96GM5 AL031963.3-201ENST00000606441 850 ntBASIC21.22■□□□□ 0.99
SMARCD1Q96GM5 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMARCD1Q96GM5 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMARCD1Q96GM5 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.22■□□□□ 0.99
SMARCD1Q96GM5 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.22■□□□□ 0.99
SMARCD1Q96GM5 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMARCD1Q96GM5 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
SMARCD1Q96GM5 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMARCD1Q96GM5 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.22■□□□□ 0.99
SMARCD1Q96GM5 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
SMARCD1Q96GM5 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMARCD1Q96GM5 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMARCD1Q96GM5 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMARCD1Q96GM5 KRT8P20-201ENST00000423953 1409 ntBASIC21.21■□□□□ 0.99
SMARCD1Q96GM5 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SMARCD1Q96GM5 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMARCD1Q96GM5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
SMARCD1Q96GM5 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SMARCD1Q96GM5 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMARCD1Q96GM5 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SMARCD1Q96GM5 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMARCD1Q96GM5 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.21■□□□□ 0.99
SMARCD1Q96GM5 AC073648.6-201ENST00000641589 218 ntBASIC21.21■□□□□ 0.99
SMARCD1Q96GM5 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
SMARCD1Q96GM5 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SMARCD1Q96GM5 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.21■□□□□ 0.99
SMARCD1Q96GM5 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.21■□□□□ 0.99
SMARCD1Q96GM5 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCD1Q96GM5 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SMARCD1Q96GM5 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.2■□□□□ 0.98
SMARCD1Q96GM5 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCD1Q96GM5 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms