Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
LDB1Q86U70 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.15■□□□□ 0.82
LDB1Q86U70 AL050303.2-201ENST00000619798 666 ntBASIC20.15■□□□□ 0.82
LDB1Q86U70 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LDB1Q86U70 AC008694.1-202ENST00000636953 945 ntBASIC20.15■□□□□ 0.82
LDB1Q86U70 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.15■□□□□ 0.82
LDB1Q86U70 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.15■□□□□ 0.82
LDB1Q86U70 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LDB1Q86U70 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LDB1Q86U70 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.15■□□□□ 0.82
LDB1Q86U70 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LDB1Q86U70 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LDB1Q86U70 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LDB1Q86U70 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LDB1Q86U70 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
LDB1Q86U70 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LDB1Q86U70 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.14■□□□□ 0.82
LDB1Q86U70 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.14■□□□□ 0.82
LDB1Q86U70 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LDB1Q86U70 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LDB1Q86U70 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
LDB1Q86U70 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.14■□□□□ 0.81
LDB1Q86U70 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
LDB1Q86U70 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LDB1Q86U70 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LDB1Q86U70 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
LDB1Q86U70 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.14■□□□□ 0.81
LDB1Q86U70 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LDB1Q86U70 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.14■□□□□ 0.81
LDB1Q86U70 RAP2CP1-201ENST00000605103 478 ntBASIC20.14■□□□□ 0.81
LDB1Q86U70 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.14■□□□□ 0.81
LDB1Q86U70 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
LDB1Q86U70 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LDB1Q86U70 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
LDB1Q86U70 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
LDB1Q86U70 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.13■□□□□ 0.81
LDB1Q86U70 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LDB1Q86U70 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LDB1Q86U70 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.13■□□□□ 0.81
LDB1Q86U70 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.13■□□□□ 0.81
LDB1Q86U70 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.13■□□□□ 0.81
LDB1Q86U70 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LDB1Q86U70 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.13■□□□□ 0.81
LDB1Q86U70 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LDB1Q86U70 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LDB1Q86U70 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
LDB1Q86U70 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
LDB1Q86U70 PGM5P4-201ENST00000421970 445 ntBASIC20.13■□□□□ 0.81
LDB1Q86U70 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.13■□□□□ 0.81
LDB1Q86U70 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.13■□□□□ 0.81
LDB1Q86U70 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.13■□□□□ 0.81
LDB1Q86U70 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LDB1Q86U70 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.12■□□□□ 0.81
LDB1Q86U70 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LDB1Q86U70 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LDB1Q86U70 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LDB1Q86U70 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.12■□□□□ 0.81
LDB1Q86U70 AC010980.2-201ENST00000587099 1412 ntBASIC20.12■□□□□ 0.81
LDB1Q86U70 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LDB1Q86U70 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
LDB1Q86U70 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.12■□□□□ 0.81
LDB1Q86U70 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LDB1Q86U70 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.12■□□□□ 0.81
LDB1Q86U70 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LDB1Q86U70 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LDB1Q86U70 MIR663A-201ENST00000385250 93 ntBASIC20.12■□□□□ 0.81
LDB1Q86U70 KRT18P68-201ENST00000392293 1000 ntBASIC20.12■□□□□ 0.81
LDB1Q86U70 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.12■□□□□ 0.81
LDB1Q86U70 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.12■□□□□ 0.81
LDB1Q86U70 CYP2T3P-201ENST00000601990 817 ntBASIC20.12■□□□□ 0.81
LDB1Q86U70 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LDB1Q86U70 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
LDB1Q86U70 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
LDB1Q86U70 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
LDB1Q86U70 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LDB1Q86U70 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.12■□□□□ 0.81
LDB1Q86U70 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.12■□□□□ 0.81
LDB1Q86U70 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LDB1Q86U70 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.11■□□□□ 0.81
LDB1Q86U70 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.11■□□□□ 0.81
LDB1Q86U70 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LDB1Q86U70 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LDB1Q86U70 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LDB1Q86U70 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LDB1Q86U70 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LDB1Q86U70 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LDB1Q86U70 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.11■□□□□ 0.81
LDB1Q86U70 CROCCP5-201ENST00000436658 830 ntBASIC20.11■□□□□ 0.81
LDB1Q86U70 AC026185.1-201ENST00000445748 174 ntBASIC20.11■□□□□ 0.81
LDB1Q86U70 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.11■□□□□ 0.81
LDB1Q86U70 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
LDB1Q86U70 AC100791.3-201ENST00000617619 330 ntBASIC20.11■□□□□ 0.81
LDB1Q86U70 OR10C1-204ENST00000622521 1039 ntBASIC20.11■□□□□ 0.81
LDB1Q86U70 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.11■□□□□ 0.81
LDB1Q86U70 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
LDB1Q86U70 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
LDB1Q86U70 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LDB1Q86U70 KRT17P1-201ENST00000399211 1546 ntBASIC20.11■□□□□ 0.81
LDB1Q86U70 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LDB1Q86U70 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms