Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.57■□□□□ 0.56
ZNF550Q7Z398 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF550Q7Z398 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF550Q7Z398 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF550Q7Z398 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF550Q7Z398 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.57■□□□□ 0.56
ZNF550Q7Z398 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF550Q7Z398 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF550Q7Z398 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF550Q7Z398 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF550Q7Z398 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.56■□□□□ 0.56
ZNF550Q7Z398 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF550Q7Z398 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF550Q7Z398 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF550Q7Z398 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF550Q7Z398 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.56■□□□□ 0.56
ZNF550Q7Z398 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.56■□□□□ 0.56
ZNF550Q7Z398 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.56■□□□□ 0.56
ZNF550Q7Z398 AC016405.3-201ENST00000607710 860 ntBASIC18.56■□□□□ 0.56
ZNF550Q7Z398 AC100791.3-201ENST00000617619 330 ntBASIC18.56■□□□□ 0.56
ZNF550Q7Z398 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF550Q7Z398 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF550Q7Z398 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF550Q7Z398 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF550Q7Z398 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.56■□□□□ 0.56
ZNF550Q7Z398 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.56■□□□□ 0.56
ZNF550Q7Z398 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ZNF550Q7Z398 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF550Q7Z398 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.55■□□□□ 0.56
ZNF550Q7Z398 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF550Q7Z398 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF550Q7Z398 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF550Q7Z398 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF550Q7Z398 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF550Q7Z398 CNN2P6-201ENST00000439038 900 ntBASIC18.55■□□□□ 0.56
ZNF550Q7Z398 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF550Q7Z398 RARRES2P4-201ENST00000514074 484 ntBASIC18.55■□□□□ 0.56
ZNF550Q7Z398 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.55■□□□□ 0.56
ZNF550Q7Z398 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.55■□□□□ 0.56
ZNF550Q7Z398 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF550Q7Z398 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.55■□□□□ 0.56
ZNF550Q7Z398 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
ZNF550Q7Z398 AL121832.2-201ENST00000610979 668 ntBASIC18.55■□□□□ 0.56
ZNF550Q7Z398 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF550Q7Z398 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF550Q7Z398 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF550Q7Z398 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.54■□□□□ 0.56
ZNF550Q7Z398 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.54■□□□□ 0.56
ZNF550Q7Z398 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF550Q7Z398 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF550Q7Z398 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF550Q7Z398 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.54■□□□□ 0.56
ZNF550Q7Z398 SLC25A24-204ENST00000569674 2357 ntBASIC18.54■□□□□ 0.56
ZNF550Q7Z398 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF550Q7Z398 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.54■□□□□ 0.56
ZNF550Q7Z398 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.54■□□□□ 0.56
ZNF550Q7Z398 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF550Q7Z398 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF550Q7Z398 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
ZNF550Q7Z398 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.54■□□□□ 0.56
ZNF550Q7Z398 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF550Q7Z398 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.54■□□□□ 0.56
ZNF550Q7Z398 AC083906.2-201ENST00000511578 360 ntBASIC18.54■□□□□ 0.56
ZNF550Q7Z398 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.54■□□□□ 0.56
ZNF550Q7Z398 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.54■□□□□ 0.56
ZNF550Q7Z398 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.54■□□□□ 0.56
ZNF550Q7Z398 AC068338.2-201ENST00000563278 1430 ntBASIC18.54■□□□□ 0.56
ZNF550Q7Z398 AC099778.1-201ENST00000568593 1911 ntBASIC18.54■□□□□ 0.56
ZNF550Q7Z398 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF550Q7Z398 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF550Q7Z398 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF550Q7Z398 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF550Q7Z398 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.54■□□□□ 0.56
ZNF550Q7Z398 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF550Q7Z398 DPP3P2-201ENST00000416030 1696 ntBASIC18.54■□□□□ 0.56
ZNF550Q7Z398 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF550Q7Z398 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF550Q7Z398 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF550Q7Z398 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.53■□□□□ 0.56
ZNF550Q7Z398 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF550Q7Z398 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
ZNF550Q7Z398 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.53■□□□□ 0.56
ZNF550Q7Z398 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF550Q7Z398 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.53■□□□□ 0.56
ZNF550Q7Z398 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF550Q7Z398 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
ZNF550Q7Z398 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF550Q7Z398 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF550Q7Z398 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF550Q7Z398 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF550Q7Z398 MCRIP2P1-201ENST00000394346 511 ntBASIC18.53■□□□□ 0.56
ZNF550Q7Z398 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.53■□□□□ 0.56
ZNF550Q7Z398 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF550Q7Z398 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.53■□□□□ 0.56
ZNF550Q7Z398 AC069236.1-201ENST00000604339 616 ntBASIC18.53■□□□□ 0.56
ZNF550Q7Z398 AC008694.1-202ENST00000636953 945 ntBASIC18.53■□□□□ 0.56
ZNF550Q7Z398 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF550Q7Z398 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.53■□□□□ 0.56
ZNF550Q7Z398 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.53■□□□□ 0.56
ZNF550Q7Z398 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms