Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
RAPH1Q70E73 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAPH1Q70E73 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAPH1Q70E73 AC007322.3-201ENST00000426526 701 ntBASIC20.2■□□□□ 0.82
RAPH1Q70E73 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.2■□□□□ 0.82
RAPH1Q70E73 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.2■□□□□ 0.82
RAPH1Q70E73 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.2■□□□□ 0.82
RAPH1Q70E73 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.2■□□□□ 0.82
RAPH1Q70E73 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAPH1Q70E73 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.2■□□□□ 0.82
RAPH1Q70E73 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAPH1Q70E73 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAPH1Q70E73 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAPH1Q70E73 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RAPH1Q70E73 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAPH1Q70E73 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RAPH1Q70E73 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.19■□□□□ 0.82
RAPH1Q70E73 RBM17P2-201ENST00000616397 1405 ntBASIC20.19■□□□□ 0.82
RAPH1Q70E73 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.19■□□□□ 0.82
RAPH1Q70E73 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
RAPH1Q70E73 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAPH1Q70E73 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.19■□□□□ 0.82
RAPH1Q70E73 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RAPH1Q70E73 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
RAPH1Q70E73 AC091799.1-201ENST00000422823 811 ntBASIC20.19■□□□□ 0.82
RAPH1Q70E73 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAPH1Q70E73 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAPH1Q70E73 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.19■□□□□ 0.82
RAPH1Q70E73 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
RAPH1Q70E73 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAPH1Q70E73 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RAPH1Q70E73 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RAPH1Q70E73 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAPH1Q70E73 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAPH1Q70E73 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.18■□□□□ 0.82
RAPH1Q70E73 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.18■□□□□ 0.82
RAPH1Q70E73 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAPH1Q70E73 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
RAPH1Q70E73 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.18■□□□□ 0.82
RAPH1Q70E73 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
RAPH1Q70E73 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAPH1Q70E73 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAPH1Q70E73 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RAPH1Q70E73 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
RAPH1Q70E73 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.18■□□□□ 0.82
RAPH1Q70E73 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.18■□□□□ 0.82
RAPH1Q70E73 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.18■□□□□ 0.82
RAPH1Q70E73 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.18■□□□□ 0.82
RAPH1Q70E73 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.18■□□□□ 0.82
RAPH1Q70E73 AC243732.1-201ENST00000612648 864 ntBASIC20.18■□□□□ 0.82
RAPH1Q70E73 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAPH1Q70E73 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAPH1Q70E73 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
RAPH1Q70E73 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAPH1Q70E73 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAPH1Q70E73 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAPH1Q70E73 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAPH1Q70E73 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
RAPH1Q70E73 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAPH1Q70E73 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
RAPH1Q70E73 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
RAPH1Q70E73 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.17■□□□□ 0.82
RAPH1Q70E73 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAPH1Q70E73 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAPH1Q70E73 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAPH1Q70E73 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAPH1Q70E73 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
RAPH1Q70E73 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAPH1Q70E73 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.17■□□□□ 0.82
RAPH1Q70E73 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAPH1Q70E73 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAPH1Q70E73 TCF3P1-201ENST00000423021 1937 ntBASIC20.17■□□□□ 0.82
RAPH1Q70E73 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAPH1Q70E73 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.17■□□□□ 0.82
RAPH1Q70E73 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RAPH1Q70E73 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAPH1Q70E73 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAPH1Q70E73 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.16■□□□□ 0.82
RAPH1Q70E73 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAPH1Q70E73 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAPH1Q70E73 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAPH1Q70E73 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAPH1Q70E73 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAPH1Q70E73 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAPH1Q70E73 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAPH1Q70E73 KRT19P1-201ENST00000405746 1186 ntBASIC20.16■□□□□ 0.82
RAPH1Q70E73 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAPH1Q70E73 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAPH1Q70E73 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.16■□□□□ 0.82
RAPH1Q70E73 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.16■□□□□ 0.82
RAPH1Q70E73 SLC7A5P1-201ENST00000568957 537 ntBASIC20.16■□□□□ 0.82
RAPH1Q70E73 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAPH1Q70E73 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.16■□□□□ 0.82
RAPH1Q70E73 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAPH1Q70E73 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAPH1Q70E73 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
RAPH1Q70E73 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAPH1Q70E73 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAPH1Q70E73 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.16■□□□□ 0.82
RAPH1Q70E73 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms