Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.86■□□□□ 0.61
RTL4Q6ZR62 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTL4Q6ZR62 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTL4Q6ZR62 CYP21A1P-202ENST00000354927 1481 ntBASIC18.86■□□□□ 0.61
RTL4Q6ZR62 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RTL4Q6ZR62 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTL4Q6ZR62 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.86■□□□□ 0.61
RTL4Q6ZR62 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RTL4Q6ZR62 KRT18P68-201ENST00000392293 1000 ntBASIC18.86■□□□□ 0.61
RTL4Q6ZR62 DUSP5P2-201ENST00000426873 1033 ntBASIC18.86■□□□□ 0.61
RTL4Q6ZR62 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.86■□□□□ 0.61
RTL4Q6ZR62 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.86■□□□□ 0.61
RTL4Q6ZR62 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.86■□□□□ 0.61
RTL4Q6ZR62 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTL4Q6ZR62 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RTL4Q6ZR62 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RTL4Q6ZR62 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.86■□□□□ 0.61
RTL4Q6ZR62 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RTL4Q6ZR62 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTL4Q6ZR62 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTL4Q6ZR62 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RTL4Q6ZR62 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTL4Q6ZR62 AC121338.2-201ENST00000622535 1744 ntBASIC18.86■□□□□ 0.61
RTL4Q6ZR62 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RTL4Q6ZR62 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTL4Q6ZR62 KRT17P1-201ENST00000399211 1546 ntBASIC18.85■□□□□ 0.61
RTL4Q6ZR62 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RTL4Q6ZR62 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.85■□□□□ 0.61
RTL4Q6ZR62 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTL4Q6ZR62 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.85■□□□□ 0.61
RTL4Q6ZR62 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
RTL4Q6ZR62 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTL4Q6ZR62 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.85■□□□□ 0.61
RTL4Q6ZR62 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RTL4Q6ZR62 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTL4Q6ZR62 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTL4Q6ZR62 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTL4Q6ZR62 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTL4Q6ZR62 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.85■□□□□ 0.61
RTL4Q6ZR62 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
RTL4Q6ZR62 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RTL4Q6ZR62 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RTL4Q6ZR62 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RTL4Q6ZR62 AC091874.3-201ENST00000512672 1195 ntBASIC18.85■□□□□ 0.61
RTL4Q6ZR62 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.85■□□□□ 0.61
RTL4Q6ZR62 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTL4Q6ZR62 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTL4Q6ZR62 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTL4Q6ZR62 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RTL4Q6ZR62 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTL4Q6ZR62 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTL4Q6ZR62 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTL4Q6ZR62 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTL4Q6ZR62 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTL4Q6ZR62 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.84■□□□□ 0.61
RTL4Q6ZR62 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
RTL4Q6ZR62 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
RTL4Q6ZR62 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.84■□□□□ 0.61
RTL4Q6ZR62 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.84■□□□□ 0.61
RTL4Q6ZR62 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.84■□□□□ 0.61
RTL4Q6ZR62 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTL4Q6ZR62 MYC-209ENST00000641252 345 ntBASIC18.84■□□□□ 0.61
RTL4Q6ZR62 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTL4Q6ZR62 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.84■□□□□ 0.61
RTL4Q6ZR62 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTL4Q6ZR62 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RTL4Q6ZR62 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.84■□□□□ 0.61
RTL4Q6ZR62 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RTL4Q6ZR62 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RTL4Q6ZR62 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RTL4Q6ZR62 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.83■□□□□ 0.61
RTL4Q6ZR62 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RTL4Q6ZR62 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RTL4Q6ZR62 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.83■□□□□ 0.61
RTL4Q6ZR62 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RTL4Q6ZR62 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.83■□□□□ 0.61
RTL4Q6ZR62 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RTL4Q6ZR62 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
RTL4Q6ZR62 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RTL4Q6ZR62 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTL4Q6ZR62 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
RTL4Q6ZR62 PGM5P4-201ENST00000421970 445 ntBASIC18.83■□□□□ 0.6
RTL4Q6ZR62 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RTL4Q6ZR62 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.83■□□□□ 0.6
RTL4Q6ZR62 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.83■□□□□ 0.6
RTL4Q6ZR62 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTL4Q6ZR62 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.83■□□□□ 0.6
RTL4Q6ZR62 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.83■□□□□ 0.6
RTL4Q6ZR62 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTL4Q6ZR62 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RTL4Q6ZR62 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RTL4Q6ZR62 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RTL4Q6ZR62 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RTL4Q6ZR62 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.83■□□□□ 0.6
RTL4Q6ZR62 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RTL4Q6ZR62 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTL4Q6ZR62 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.82■□□□□ 0.6
RTL4Q6ZR62 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RTL4Q6ZR62 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.82■□□□□ 0.6
RTL4Q6ZR62 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms