Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.11■□□□□ 0.49
NHLRC1Q6VVB1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NHLRC1Q6VVB1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NHLRC1Q6VVB1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NHLRC1Q6VVB1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NHLRC1Q6VVB1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.11■□□□□ 0.49
NHLRC1Q6VVB1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
NHLRC1Q6VVB1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NHLRC1Q6VVB1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NHLRC1Q6VVB1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NHLRC1Q6VVB1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NHLRC1Q6VVB1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NHLRC1Q6VVB1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.11■□□□□ 0.49
NHLRC1Q6VVB1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NHLRC1Q6VVB1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NHLRC1Q6VVB1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.1■□□□□ 0.49
NHLRC1Q6VVB1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
NHLRC1Q6VVB1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NHLRC1Q6VVB1 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NHLRC1Q6VVB1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NHLRC1Q6VVB1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NHLRC1Q6VVB1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NHLRC1Q6VVB1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NHLRC1Q6VVB1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NHLRC1Q6VVB1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NHLRC1Q6VVB1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.1■□□□□ 0.49
NHLRC1Q6VVB1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.1■□□□□ 0.49
NHLRC1Q6VVB1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.1■□□□□ 0.49
NHLRC1Q6VVB1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.1■□□□□ 0.49
NHLRC1Q6VVB1 CROCCP5-201ENST00000436658 830 ntBASIC18.1■□□□□ 0.49
NHLRC1Q6VVB1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.1■□□□□ 0.49
NHLRC1Q6VVB1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NHLRC1Q6VVB1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.1■□□□□ 0.49
NHLRC1Q6VVB1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NHLRC1Q6VVB1 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.1■□□□□ 0.49
NHLRC1Q6VVB1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NHLRC1Q6VVB1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.1■□□□□ 0.49
NHLRC1Q6VVB1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
NHLRC1Q6VVB1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
NHLRC1Q6VVB1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NHLRC1Q6VVB1 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NHLRC1Q6VVB1 AC010980.2-201ENST00000587099 1412 ntBASIC18.09■□□□□ 0.49
NHLRC1Q6VVB1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.09■□□□□ 0.49
NHLRC1Q6VVB1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NHLRC1Q6VVB1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NHLRC1Q6VVB1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.09■□□□□ 0.49
NHLRC1Q6VVB1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
NHLRC1Q6VVB1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NHLRC1Q6VVB1 AC026185.1-201ENST00000445748 174 ntBASIC18.09■□□□□ 0.49
NHLRC1Q6VVB1 AC093787.1-201ENST00000450396 207 ntBASIC18.09■□□□□ 0.49
NHLRC1Q6VVB1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.09■□□□□ 0.49
NHLRC1Q6VVB1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.09■□□□□ 0.49
NHLRC1Q6VVB1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
NHLRC1Q6VVB1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
NHLRC1Q6VVB1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
NHLRC1Q6VVB1 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.09■□□□□ 0.49
NHLRC1Q6VVB1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NHLRC1Q6VVB1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NHLRC1Q6VVB1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
NHLRC1Q6VVB1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NHLRC1Q6VVB1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NHLRC1Q6VVB1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.08■□□□□ 0.49
NHLRC1Q6VVB1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NHLRC1Q6VVB1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
NHLRC1Q6VVB1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NHLRC1Q6VVB1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NHLRC1Q6VVB1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
NHLRC1Q6VVB1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NHLRC1Q6VVB1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.08■□□□□ 0.48
NHLRC1Q6VVB1 AC069236.1-201ENST00000604339 616 ntBASIC18.08■□□□□ 0.48
NHLRC1Q6VVB1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.08■□□□□ 0.48
NHLRC1Q6VVB1 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.08■□□□□ 0.48
NHLRC1Q6VVB1 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.08■□□□□ 0.48
NHLRC1Q6VVB1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.08■□□□□ 0.48
NHLRC1Q6VVB1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.08■□□□□ 0.48
NHLRC1Q6VVB1 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NHLRC1Q6VVB1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
NHLRC1Q6VVB1 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
NHLRC1Q6VVB1 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
NHLRC1Q6VVB1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.08■□□□□ 0.48
NHLRC1Q6VVB1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.08■□□□□ 0.48
NHLRC1Q6VVB1 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NHLRC1Q6VVB1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NHLRC1Q6VVB1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NHLRC1Q6VVB1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NHLRC1Q6VVB1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NHLRC1Q6VVB1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.08■□□□□ 0.48
NHLRC1Q6VVB1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NHLRC1Q6VVB1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NHLRC1Q6VVB1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.07■□□□□ 0.48
NHLRC1Q6VVB1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NHLRC1Q6VVB1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
NHLRC1Q6VVB1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.07■□□□□ 0.48
NHLRC1Q6VVB1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
NHLRC1Q6VVB1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NHLRC1Q6VVB1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NHLRC1Q6VVB1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NHLRC1Q6VVB1 KRT18P68-201ENST00000392293 1000 ntBASIC18.07■□□□□ 0.48
NHLRC1Q6VVB1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.07■□□□□ 0.48
NHLRC1Q6VVB1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms