Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.52■□□□□ 0.88
CASC4Q6P4E1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.52■□□□□ 0.88
CASC4Q6P4E1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CASC4Q6P4E1 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.52■□□□□ 0.88
CASC4Q6P4E1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CASC4Q6P4E1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CASC4Q6P4E1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
CASC4Q6P4E1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.52■□□□□ 0.87
CASC4Q6P4E1 KRT8P36-201ENST00000489121 1440 ntBASIC20.52■□□□□ 0.87
CASC4Q6P4E1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.52■□□□□ 0.87
CASC4Q6P4E1 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CASC4Q6P4E1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CASC4Q6P4E1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CASC4Q6P4E1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.51■□□□□ 0.87
CASC4Q6P4E1 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CASC4Q6P4E1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CASC4Q6P4E1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CASC4Q6P4E1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CASC4Q6P4E1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CASC4Q6P4E1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.51■□□□□ 0.87
CASC4Q6P4E1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CASC4Q6P4E1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CASC4Q6P4E1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.51■□□□□ 0.87
CASC4Q6P4E1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CASC4Q6P4E1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
CASC4Q6P4E1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.51■□□□□ 0.87
CASC4Q6P4E1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CASC4Q6P4E1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CASC4Q6P4E1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
CASC4Q6P4E1 DPP3P2-201ENST00000416030 1696 ntBASIC20.51■□□□□ 0.87
CASC4Q6P4E1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CASC4Q6P4E1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CASC4Q6P4E1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CASC4Q6P4E1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.5■□□□□ 0.87
CASC4Q6P4E1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CASC4Q6P4E1 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.5■□□□□ 0.87
CASC4Q6P4E1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.5■□□□□ 0.87
CASC4Q6P4E1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.5■□□□□ 0.87
CASC4Q6P4E1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
CASC4Q6P4E1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CASC4Q6P4E1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.5■□□□□ 0.87
CASC4Q6P4E1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.5■□□□□ 0.87
CASC4Q6P4E1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CASC4Q6P4E1 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.5■□□□□ 0.87
CASC4Q6P4E1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CASC4Q6P4E1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CASC4Q6P4E1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CASC4Q6P4E1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CASC4Q6P4E1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.49■□□□□ 0.87
CASC4Q6P4E1 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CASC4Q6P4E1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CASC4Q6P4E1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CASC4Q6P4E1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CASC4Q6P4E1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CASC4Q6P4E1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CASC4Q6P4E1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CASC4Q6P4E1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CASC4Q6P4E1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CASC4Q6P4E1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CASC4Q6P4E1 AC097381.1-201ENST00000429019 1296 ntBASIC20.49■□□□□ 0.87
CASC4Q6P4E1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CASC4Q6P4E1 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.49■□□□□ 0.87
CASC4Q6P4E1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CASC4Q6P4E1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CASC4Q6P4E1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.49■□□□□ 0.87
CASC4Q6P4E1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CASC4Q6P4E1 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CASC4Q6P4E1 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CASC4Q6P4E1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CASC4Q6P4E1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CASC4Q6P4E1 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.49■□□□□ 0.87
CASC4Q6P4E1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CASC4Q6P4E1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
CASC4Q6P4E1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.48■□□□□ 0.87
CASC4Q6P4E1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CASC4Q6P4E1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CASC4Q6P4E1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CASC4Q6P4E1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CASC4Q6P4E1 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CASC4Q6P4E1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CASC4Q6P4E1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CASC4Q6P4E1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.48■□□□□ 0.87
CASC4Q6P4E1 TERF1P5-201ENST00000477545 1207 ntBASIC20.48■□□□□ 0.87
CASC4Q6P4E1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.48■□□□□ 0.87
CASC4Q6P4E1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CASC4Q6P4E1 AC010536.3-201ENST00000620306 533 ntBASIC20.48■□□□□ 0.87
CASC4Q6P4E1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.48■□□□□ 0.87
CASC4Q6P4E1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CASC4Q6P4E1 TCF3P1-201ENST00000423021 1937 ntBASIC20.48■□□□□ 0.87
CASC4Q6P4E1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
CASC4Q6P4E1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CASC4Q6P4E1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CASC4Q6P4E1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.48■□□□□ 0.87
CASC4Q6P4E1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CASC4Q6P4E1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.48■□□□□ 0.87
CASC4Q6P4E1 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CASC4Q6P4E1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CASC4Q6P4E1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
CASC4Q6P4E1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.47■□□□□ 0.87
CASC4Q6P4E1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms