Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
REEP3Q6NUK4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
REEP3Q6NUK4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
REEP3Q6NUK4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
REEP3Q6NUK4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
REEP3Q6NUK4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
REEP3Q6NUK4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
REEP3Q6NUK4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
REEP3Q6NUK4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
REEP3Q6NUK4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
REEP3Q6NUK4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.78■□□□□ 0.6
REEP3Q6NUK4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.78■□□□□ 0.6
REEP3Q6NUK4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.78■□□□□ 0.6
REEP3Q6NUK4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
REEP3Q6NUK4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
REEP3Q6NUK4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
REEP3Q6NUK4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.78■□□□□ 0.6
REEP3Q6NUK4 AL591742.1-201ENST00000604433 565 ntBASIC18.78■□□□□ 0.6
REEP3Q6NUK4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
REEP3Q6NUK4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
REEP3Q6NUK4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
REEP3Q6NUK4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
REEP3Q6NUK4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
REEP3Q6NUK4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
REEP3Q6NUK4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
REEP3Q6NUK4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
REEP3Q6NUK4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.78■□□□□ 0.6
REEP3Q6NUK4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.78■□□□□ 0.6
REEP3Q6NUK4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
REEP3Q6NUK4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.77■□□□□ 0.6
REEP3Q6NUK4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.77■□□□□ 0.6
REEP3Q6NUK4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
REEP3Q6NUK4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
REEP3Q6NUK4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.77■□□□□ 0.6
REEP3Q6NUK4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
REEP3Q6NUK4 BX119927.1-201ENST00000636596 1552 ntBASIC18.77■□□□□ 0.6
REEP3Q6NUK4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
REEP3Q6NUK4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
REEP3Q6NUK4 AC087633.2-202ENST00000565166 1439 ntBASIC18.77■□□□□ 0.6
REEP3Q6NUK4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
REEP3Q6NUK4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.77■□□□□ 0.6
REEP3Q6NUK4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
REEP3Q6NUK4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.77■□□□□ 0.6
REEP3Q6NUK4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.77■□□□□ 0.6
REEP3Q6NUK4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
REEP3Q6NUK4 AL356652.1-201ENST00000615962 565 ntBASIC18.77■□□□□ 0.6
REEP3Q6NUK4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
REEP3Q6NUK4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
REEP3Q6NUK4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
REEP3Q6NUK4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.77■□□□□ 0.6
REEP3Q6NUK4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.77■□□□□ 0.6
REEP3Q6NUK4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
REEP3Q6NUK4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.77■□□□□ 0.59
REEP3Q6NUK4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
REEP3Q6NUK4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
REEP3Q6NUK4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
REEP3Q6NUK4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
REEP3Q6NUK4 AL691432.2-201ENST00000607222 2038 ntBASIC18.76■□□□□ 0.59
REEP3Q6NUK4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
REEP3Q6NUK4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
REEP3Q6NUK4 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.76■□□□□ 0.59
REEP3Q6NUK4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
REEP3Q6NUK4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
REEP3Q6NUK4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.76■□□□□ 0.59
REEP3Q6NUK4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
REEP3Q6NUK4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.76■□□□□ 0.59
REEP3Q6NUK4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.76■□□□□ 0.59
REEP3Q6NUK4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
REEP3Q6NUK4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
REEP3Q6NUK4 TERF1P5-201ENST00000477545 1207 ntBASIC18.76■□□□□ 0.59
REEP3Q6NUK4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.76■□□□□ 0.59
REEP3Q6NUK4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.76■□□□□ 0.59
REEP3Q6NUK4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
REEP3Q6NUK4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
REEP3Q6NUK4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
REEP3Q6NUK4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
REEP3Q6NUK4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
REEP3Q6NUK4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
REEP3Q6NUK4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
REEP3Q6NUK4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
REEP3Q6NUK4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
REEP3Q6NUK4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.75■□□□□ 0.59
REEP3Q6NUK4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.75■□□□□ 0.59
REEP3Q6NUK4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
REEP3Q6NUK4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
REEP3Q6NUK4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.75■□□□□ 0.59
REEP3Q6NUK4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
REEP3Q6NUK4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
REEP3Q6NUK4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
REEP3Q6NUK4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
REEP3Q6NUK4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
REEP3Q6NUK4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
REEP3Q6NUK4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
REEP3Q6NUK4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.75■□□□□ 0.59
REEP3Q6NUK4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.75■□□□□ 0.59
REEP3Q6NUK4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.75■□□□□ 0.59
REEP3Q6NUK4 AC010536.3-201ENST00000620306 533 ntBASIC18.75■□□□□ 0.59
REEP3Q6NUK4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
REEP3Q6NUK4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
REEP3Q6NUK4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms