Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VARS2Q5ST30 AC026310.3-201ENST00000625186 2373 ntBASIC21.44■■□□□ 1.02
VARS2Q5ST30 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
VARS2Q5ST30 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.43■■□□□ 1.02
VARS2Q5ST30 KRASP1-201ENST00000407852 552 ntBASIC21.43■■□□□ 1.02
VARS2Q5ST30 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VARS2Q5ST30 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.43■■□□□ 1.02
VARS2Q5ST30 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.43■■□□□ 1.02
VARS2Q5ST30 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
VARS2Q5ST30 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
VARS2Q5ST30 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.43■■□□□ 1.02
VARS2Q5ST30 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
VARS2Q5ST30 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VARS2Q5ST30 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
VARS2Q5ST30 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.43■■□□□ 1.02
VARS2Q5ST30 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
VARS2Q5ST30 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
VARS2Q5ST30 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
VARS2Q5ST30 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
VARS2Q5ST30 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
VARS2Q5ST30 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
VARS2Q5ST30 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
VARS2Q5ST30 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
VARS2Q5ST30 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.42■■□□□ 1.02
VARS2Q5ST30 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
VARS2Q5ST30 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
VARS2Q5ST30 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.42■■□□□ 1.02
VARS2Q5ST30 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.42■■□□□ 1.02
VARS2Q5ST30 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.42■■□□□ 1.02
VARS2Q5ST30 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.42■■□□□ 1.02
VARS2Q5ST30 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
VARS2Q5ST30 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
VARS2Q5ST30 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.42■■□□□ 1.02
VARS2Q5ST30 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
VARS2Q5ST30 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
VARS2Q5ST30 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
VARS2Q5ST30 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
VARS2Q5ST30 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
VARS2Q5ST30 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.41■■□□□ 1.02
VARS2Q5ST30 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
VARS2Q5ST30 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
VARS2Q5ST30 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
VARS2Q5ST30 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
VARS2Q5ST30 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
VARS2Q5ST30 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.41■■□□□ 1.02
VARS2Q5ST30 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.41■■□□□ 1.02
VARS2Q5ST30 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.41■■□□□ 1.02
VARS2Q5ST30 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.41■■□□□ 1.02
VARS2Q5ST30 AC110285.5-201ENST00000611501 352 ntBASIC21.41■■□□□ 1.02
VARS2Q5ST30 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
VARS2Q5ST30 AC124283.5-201ENST00000624661 1809 ntBASIC21.41■■□□□ 1.02
VARS2Q5ST30 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
VARS2Q5ST30 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
VARS2Q5ST30 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.4■■□□□ 1.02
VARS2Q5ST30 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.4■■□□□ 1.02
VARS2Q5ST30 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
VARS2Q5ST30 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
VARS2Q5ST30 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
VARS2Q5ST30 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
VARS2Q5ST30 ECEL1P3-201ENST00000427961 737 ntBASIC21.4■■□□□ 1.02
VARS2Q5ST30 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
VARS2Q5ST30 FAM210CP-201ENST00000445714 574 ntBASIC21.4■■□□□ 1.02
VARS2Q5ST30 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
VARS2Q5ST30 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.4■■□□□ 1.02
VARS2Q5ST30 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.4■■□□□ 1.02
VARS2Q5ST30 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
VARS2Q5ST30 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
VARS2Q5ST30 PTBP1P-201ENST00000554374 1601 ntBASIC21.4■■□□□ 1.02
VARS2Q5ST30 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.4■■□□□ 1.02
VARS2Q5ST30 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.02
VARS2Q5ST30 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
VARS2Q5ST30 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
VARS2Q5ST30 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
VARS2Q5ST30 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
VARS2Q5ST30 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
VARS2Q5ST30 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
VARS2Q5ST30 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.39■■□□□ 1.01
VARS2Q5ST30 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
VARS2Q5ST30 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
VARS2Q5ST30 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.39■■□□□ 1.01
VARS2Q5ST30 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
VARS2Q5ST30 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.39■■□□□ 1.01
VARS2Q5ST30 MIR4497-201ENST00000583208 89 ntBASIC21.39■■□□□ 1.01
VARS2Q5ST30 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
VARS2Q5ST30 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.38■■□□□ 1.01
VARS2Q5ST30 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
VARS2Q5ST30 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VARS2Q5ST30 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
VARS2Q5ST30 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VARS2Q5ST30 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
VARS2Q5ST30 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VARS2Q5ST30 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
VARS2Q5ST30 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
VARS2Q5ST30 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
VARS2Q5ST30 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
VARS2Q5ST30 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.38■■□□□ 1.01
VARS2Q5ST30 PRKY-204ENST00000533551 1019 ntBASIC21.38■■□□□ 1.01
VARS2Q5ST30 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.38■■□□□ 1.01
VARS2Q5ST30 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
VARS2Q5ST30 FP700111.2-201ENST00000619190 1892 ntBASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms