Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIST1H3AP68431 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HIST1H3AP68431 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
HIST1H3AP68431 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.64■□□□□ 0.42
HIST1H3AP68431 TCF3P1-201ENST00000423021 1937 ntBASIC17.64■□□□□ 0.42
HIST1H3AP68431 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
HIST1H3AP68431 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
HIST1H3AP68431 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HIST1H3AP68431 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HIST1H3AP68431 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
HIST1H3AP68431 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.64■□□□□ 0.41
HIST1H3AP68431 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.64■□□□□ 0.41
HIST1H3AP68431 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HIST1H3AP68431 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HIST1H3AP68431 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.64■□□□□ 0.41
HIST1H3AP68431 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.64■□□□□ 0.41
HIST1H3AP68431 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIST1H3AP68431 CDCA4P2-201ENST00000441182 718 ntBASIC17.64■□□□□ 0.41
HIST1H3AP68431 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.64■□□□□ 0.41
HIST1H3AP68431 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.64■□□□□ 0.41
HIST1H3AP68431 AC133552.2-202ENST00000575694 574 ntBASIC17.64■□□□□ 0.41
HIST1H3AP68431 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.64■□□□□ 0.41
HIST1H3AP68431 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HIST1H3AP68431 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIST1H3AP68431 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.64■□□□□ 0.41
HIST1H3AP68431 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.64■□□□□ 0.41
HIST1H3AP68431 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIST1H3AP68431 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIST1H3AP68431 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIST1H3AP68431 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.64■□□□□ 0.41
HIST1H3AP68431 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.64■□□□□ 0.41
HIST1H3AP68431 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIST1H3AP68431 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HIST1H3AP68431 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.64■□□□□ 0.41
HIST1H3AP68431 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.63■□□□□ 0.41
HIST1H3AP68431 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.63■□□□□ 0.41
HIST1H3AP68431 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H3AP68431 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
HIST1H3AP68431 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.63■□□□□ 0.41
HIST1H3AP68431 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H3AP68431 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H3AP68431 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H3AP68431 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H3AP68431 PTBP1P-201ENST00000554374 1601 ntBASIC17.63■□□□□ 0.41
HIST1H3AP68431 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H3AP68431 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H3AP68431 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.63■□□□□ 0.41
HIST1H3AP68431 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.63■□□□□ 0.41
HIST1H3AP68431 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.63■□□□□ 0.41
HIST1H3AP68431 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.63■□□□□ 0.41
HIST1H3AP68431 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H3AP68431 RAP2CP1-201ENST00000605103 478 ntBASIC17.63■□□□□ 0.41
HIST1H3AP68431 AL137784.2-201ENST00000607332 1000 ntBASIC17.63■□□□□ 0.41
HIST1H3AP68431 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HIST1H3AP68431 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.63■□□□□ 0.41
HIST1H3AP68431 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H3AP68431 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H3AP68431 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H3AP68431 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.63■□□□□ 0.41
HIST1H3AP68431 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H3AP68431 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H3AP68431 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H3AP68431 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
HIST1H3AP68431 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H3AP68431 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
HIST1H3AP68431 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.62■□□□□ 0.41
HIST1H3AP68431 BX119927.1-201ENST00000636596 1552 ntBASIC17.62■□□□□ 0.41
HIST1H3AP68431 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H3AP68431 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H3AP68431 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H3AP68431 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HIST1H3AP68431 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H3AP68431 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.62■□□□□ 0.41
HIST1H3AP68431 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H3AP68431 AL355472.2-201ENST00000422958 438 ntBASIC17.62■□□□□ 0.41
HIST1H3AP68431 AC093787.1-201ENST00000450396 207 ntBASIC17.62■□□□□ 0.41
HIST1H3AP68431 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.62■□□□□ 0.41
HIST1H3AP68431 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.62■□□□□ 0.41
HIST1H3AP68431 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
HIST1H3AP68431 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
HIST1H3AP68431 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.62■□□□□ 0.41
HIST1H3AP68431 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H3AP68431 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H3AP68431 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H3AP68431 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.62■□□□□ 0.41
HIST1H3AP68431 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.62■□□□□ 0.41
HIST1H3AP68431 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.62■□□□□ 0.41
HIST1H3AP68431 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H3AP68431 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HIST1H3AP68431 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H3AP68431 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
HIST1H3AP68431 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.61■□□□□ 0.41
HIST1H3AP68431 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIST1H3AP68431 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIST1H3AP68431 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIST1H3AP68431 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIST1H3AP68431 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIST1H3AP68431 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.61■□□□□ 0.41
HIST1H3AP68431 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIST1H3AP68431 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms