Protein–RNA interactions for Protein: P53899

CUZ1, CDC48-associated ubiquitin-like/zinc finger protein 1, yeastyeast

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUZ1P53899 SEC63YOR254C 1992 nt2.92□□□□□ -1.94
CUZ1P53899 IRR1YIL026C 3453 nt2.92□□□□□ -1.94
CUZ1P53899 MNL2YLR057W 2550 nt2.92□□□□□ -1.94
CUZ1P53899 SYT1YPR095C 3681 nt2.91□□□□□ -1.94
CUZ1P53899 RAD34YDR314C 2079 nt2.91□□□□□ -1.94
CUZ1P53899 ZDS2YML109W 2829 nt2.91□□□□□ -1.94
CUZ1P53899 PRP6YBR055C 2700 nt2.91□□□□□ -1.94
CUZ1P53899 GCN1YGL195W 8019 nt2.91□□□□□ -1.94
CUZ1P53899 SWI1YPL016W 3945 nt2.91□□□□□ -1.94
CUZ1P53899 MET5YJR137C 4329 nt2.91□□□□□ -1.94
CUZ1P53899 DNL4YOR005C 2835 nt2.91□□□□□ -1.94
CUZ1P53899 XRS2YDR369C 2565 nt2.91□□□□□ -1.94
CUZ1P53899 SPT4YGR063C 309 nt2.9□□□□□ -1.95
CUZ1P53899 RAD5YLR032W 3510 nt2.9□□□□□ -1.95
CUZ1P53899 TAE2YPL009C 3117 nt2.9□□□□□ -1.95
CUZ1P53899 HEF3YNL014W 3135 nt2.89□□□□□ -1.95
CUZ1P53899 YEL025CYEL025C 3567 nt2.89□□□□□ -1.95
CUZ1P53899 RPS21AYKR057W 264 nt2.89□□□□□ -1.95
CUZ1P53899 SET2YJL168C 2202 nt2.89□□□□□ -1.95
CUZ1P53899 RGA2YDR379W 3030 nt2.89□□□□□ -1.95
CUZ1P53899 MIT1YEL007W 2001 nt2.88□□□□□ -1.95
CUZ1P53899 STB4YMR019W 2850 nt2.88□□□□□ -1.95
CUZ1P53899 YMR317WYMR317W 3423 nt2.88□□□□□ -1.95
CUZ1P53899 STE11YLR362W 2154 nt2.87□□□□□ -1.95
CUZ1P53899 SLX4YLR135W 2247 nt2.87□□□□□ -1.95
CUZ1P53899 CIN8YEL061C 3003 nt2.87□□□□□ -1.95
CUZ1P53899 YMR242W-AYMR242W-A 90 nt2.87□□□□□ -1.95
CUZ1P53899 RPA190YOR341W 4995 nt2.87□□□□□ -1.95
CUZ1P53899 CRM1YGR218W 3255 nt2.87□□□□□ -1.95
CUZ1P53899 NAM7YMR080C 2916 nt2.86□□□□□ -1.95
CUZ1P53899 PAU8YAL068C 363 nt2.86□□□□□ -1.95
CUZ1P53899 PAU18YLL064C 363 nt2.86□□□□□ -1.95
CUZ1P53899 PAU6YNR076W 363 nt2.86□□□□□ -1.95
CUZ1P53899 PAU20YOL161C 363 nt2.86□□□□□ -1.95
CUZ1P53899 RRP6YOR001W 2202 nt2.86□□□□□ -1.95
CUZ1P53899 SLM1YIL105C 2061 nt2.86□□□□□ -1.95
CUZ1P53899 AFI1YOR129C 2682 nt2.86□□□□□ -1.95
CUZ1P53899 FLO5YHR211W 3228 nt2.85□□□□□ -1.95
CUZ1P53899 YDR371C-AYDR371C-A 105 nt2.85□□□□□ -1.95
CUZ1P53899 IRC8YJL051W 2469 nt2.85□□□□□ -1.95
CUZ1P53899 YLL054CYLL054C 2532 nt2.85□□□□□ -1.95
CUZ1P53899 SPO22YIL073C 2928 nt2.85□□□□□ -1.95
CUZ1P53899 HSH155YMR288W 2916 nt2.85□□□□□ -1.95
CUZ1P53899 tC(GCA)BtC(GCA)B 72 nt2.84□□□□□ -1.95
CUZ1P53899 tC(GCA)GtC(GCA)G 72 nt2.84□□□□□ -1.95
CUZ1P53899 tC(GCA)P1tC(GCA)P1 72 nt2.84□□□□□ -1.95
CUZ1P53899 tC(GCA)P2tC(GCA)P2 72 nt2.84□□□□□ -1.95
CUZ1P53899 YDR354C-AYDR354C-A 144 nt2.84□□□□□ -1.95
CUZ1P53899 QCR9YGR183C 201 nt2.84□□□□□ -1.95
CUZ1P53899 YHR131W-AYHR131W-A 246 nt2.84□□□□□ -1.95
CUZ1P53899 YIL002W-AYIL002W-A 210 nt2.84□□□□□ -1.95
CUZ1P53899 YAL037C-AYAL037C-A 93 nt2.84□□□□□ -1.95
CUZ1P53899 YOR108C-AYOR108C-A 210 nt2.84□□□□□ -1.95
CUZ1P53899 DUG2YBR281C 2637 nt2.84□□□□□ -1.96
CUZ1P53899 BMS1YPL217C 3552 nt2.84□□□□□ -1.96
CUZ1P53899 INP53YOR109W 3324 nt2.83□□□□□ -1.96
CUZ1P53899 YME2YMR302C 2553 nt2.83□□□□□ -1.96
CUZ1P53899 SET1YHR119W 3243 nt2.83□□□□□ -1.96
CUZ1P53899 tF(GAA)DtF(GAA)D 73 nt2.83□□□□□ -1.96
CUZ1P53899 tF(GAA)NtF(GAA)N 73 nt2.83□□□□□ -1.96
CUZ1P53899 YLR154C-HYLR154C-H 132 nt2.83□□□□□ -1.96
CUZ1P53899 YLR156C-AYLR156C-A 132 nt2.83□□□□□ -1.96
CUZ1P53899 YLR157C-CYLR157C-C 132 nt2.83□□□□□ -1.96
CUZ1P53899 YLR159C-AYLR159C-A 132 nt2.83□□□□□ -1.96
CUZ1P53899 CAT2YML042W 2013 nt2.83□□□□□ -1.96
CUZ1P53899 ZRG8YER033C 3231 nt2.83□□□□□ -1.96
CUZ1P53899 YNL018CYNL018C 1839 nt2.82□□□□□ -1.96
CUZ1P53899 IKI3YLR384C 4050 nt2.82□□□□□ -1.96
CUZ1P53899 YDR464C-AYDR464C-A 189 nt2.82□□□□□ -1.96
CUZ1P53899 PTP2YOR208W 2253 nt2.82□□□□□ -1.96
CUZ1P53899 YDR186CYDR186C 2634 nt2.82□□□□□ -1.96
CUZ1P53899 MAD1YGL086W 2250 nt2.81□□□□□ -1.96
CUZ1P53899 CHS2YBR038W 2892 nt2.81□□□□□ -1.96
CUZ1P53899 YGL182CYGL182C 324 nt2.81□□□□□ -1.96
CUZ1P53899 CRS5YOR031W 210 nt2.81□□□□□ -1.96
CUZ1P53899 SET3YKR029C 2256 nt2.81□□□□□ -1.96
CUZ1P53899 SPO14YKR031C 5052 nt2.81□□□□□ -1.96
CUZ1P53899 SKP2YNL311C 2292 nt2.8□□□□□ -1.96
CUZ1P53899 YSP2YDR326C 4317 nt2.8□□□□□ -1.96
CUZ1P53899 IFH1YLR223C 3258 nt2.8□□□□□ -1.96
CUZ1P53899 ATG11YPR049C 3537 nt2.79□□□□□ -1.96
CUZ1P53899 SAS3YBL052C 2496 nt2.79□□□□□ -1.96
CUZ1P53899 YKR075W-AYKR075W-A 270 nt2.79□□□□□ -1.96
CUZ1P53899 SMC2YFR031C 3513 nt2.79□□□□□ -1.96
CUZ1P53899 VMR1YHL035C 4779 nt2.79□□□□□ -1.96
CUZ1P53899 TTI1YKL033W 3117 nt2.79□□□□□ -1.96
CUZ1P53899 YJL026C-AYJL026C-A 222 nt2.78□□□□□ -1.96
CUZ1P53899 SNC1YAL030W 354 nt2.78□□□□□ -1.96
CUZ1P53899 POL3YDL102W 3294 nt2.78□□□□□ -1.97
CUZ1P53899 VPS16YPL045W 2397 nt2.77□□□□□ -1.97
CUZ1P53899 KTI11YBL071W-A 249 nt2.77□□□□□ -1.97
CUZ1P53899 RGC1YPR115W 3252 nt2.77□□□□□ -1.97
CUZ1P53899 DGR2YKL121W 2559 nt2.77□□□□□ -1.97
CUZ1P53899 STB6YKL072W 2301 nt2.76□□□□□ -1.97
CUZ1P53899 YBT1YLL048C 4986 nt2.76□□□□□ -1.97
CUZ1P53899 UTP8YGR128C 2142 nt2.76□□□□□ -1.97
CUZ1P53899 tQ(UUG)BtQ(UUG)B 72 nt2.76□□□□□ -1.97
CUZ1P53899 snR39BsnR39B 96 nt2.76□□□□□ -1.97
CUZ1P53899 YLR035C-AYLR035C-A 3468 nt2.76□□□□□ -1.97
CUZ1P53899 SWR1YDR334W 4545 nt2.76□□□□□ -1.97
Retrieved 100 of 7,029 protein–RNA pairs in 94.8 ms