Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.27■□□□□ 0.84
CSNK1DP48730 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1DP48730 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.27■□□□□ 0.84
CSNK1DP48730 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
CSNK1DP48730 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.27■□□□□ 0.84
CSNK1DP48730 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1DP48730 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CSNK1DP48730 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CSNK1DP48730 ESRRAP1-201ENST00000400596 1257 ntBASIC20.27■□□□□ 0.84
CSNK1DP48730 POU5F1P3-201ENST00000428824 1078 ntBASIC20.27■□□□□ 0.84
CSNK1DP48730 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1DP48730 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.27■□□□□ 0.84
CSNK1DP48730 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.27■□□□□ 0.84
CSNK1DP48730 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.27■□□□□ 0.84
CSNK1DP48730 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.27■□□□□ 0.84
CSNK1DP48730 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.27■□□□□ 0.84
CSNK1DP48730 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CSNK1DP48730 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1DP48730 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1DP48730 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.27■□□□□ 0.84
CSNK1DP48730 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CSNK1DP48730 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CSNK1DP48730 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.27■□□□□ 0.83
CSNK1DP48730 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
CSNK1DP48730 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
CSNK1DP48730 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1DP48730 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1DP48730 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1DP48730 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1DP48730 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1DP48730 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.26■□□□□ 0.83
CSNK1DP48730 AC008687.6-201ENST00000596318 630 ntBASIC20.26■□□□□ 0.83
CSNK1DP48730 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.26■□□□□ 0.83
CSNK1DP48730 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1DP48730 AC120498.8-201ENST00000614275 531 ntBASIC20.26■□□□□ 0.83
CSNK1DP48730 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.26■□□□□ 0.83
CSNK1DP48730 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1DP48730 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1DP48730 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1DP48730 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1DP48730 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1DP48730 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1DP48730 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.26■□□□□ 0.83
CSNK1DP48730 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CSNK1DP48730 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.25■□□□□ 0.83
CSNK1DP48730 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.25■□□□□ 0.83
CSNK1DP48730 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSNK1DP48730 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSNK1DP48730 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.25■□□□□ 0.83
CSNK1DP48730 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.25■□□□□ 0.83
CSNK1DP48730 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSNK1DP48730 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.25■□□□□ 0.83
CSNK1DP48730 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSNK1DP48730 TSPY20P-201ENST00000450910 630 ntBASIC20.25■□□□□ 0.83
CSNK1DP48730 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CSNK1DP48730 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.25■□□□□ 0.83
CSNK1DP48730 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CSNK1DP48730 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.25■□□□□ 0.83
CSNK1DP48730 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CSNK1DP48730 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CSNK1DP48730 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.25■□□□□ 0.83
CSNK1DP48730 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.25■□□□□ 0.83
CSNK1DP48730 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CSNK1DP48730 AC006557.6-201ENST00000623071 864 ntBASIC20.25■□□□□ 0.83
CSNK1DP48730 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1DP48730 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1DP48730 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CSNK1DP48730 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.24■□□□□ 0.83
CSNK1DP48730 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1DP48730 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1DP48730 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CSNK1DP48730 FAM201B-201ENST00000458407 597 ntBASIC20.24■□□□□ 0.83
CSNK1DP48730 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.24■□□□□ 0.83
CSNK1DP48730 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.24■□□□□ 0.83
CSNK1DP48730 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1DP48730 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.24■□□□□ 0.83
CSNK1DP48730 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1DP48730 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CSNK1DP48730 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1DP48730 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.24■□□□□ 0.83
CSNK1DP48730 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1DP48730 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1DP48730 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1DP48730 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1DP48730 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1DP48730 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.23■□□□□ 0.83
CSNK1DP48730 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1DP48730 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.23■□□□□ 0.83
CSNK1DP48730 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1DP48730 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1DP48730 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.23■□□□□ 0.83
CSNK1DP48730 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CSNK1DP48730 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1DP48730 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.23■□□□□ 0.83
CSNK1DP48730 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.23■□□□□ 0.83
CSNK1DP48730 AL162377.1-201ENST00000618844 1793 ntBASIC20.23■□□□□ 0.83
CSNK1DP48730 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1DP48730 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1DP48730 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1DP48730 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms