Protein–RNA interactions for Protein: P40045

TDA2, Topoisomerase I damage affected protein 2, yeastyeast

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA2P40045 GUP1YGL084C 1683 nt-0.01□□□□□ -2.41
TDA2P40045 snR79snR79 84 nt-0.01□□□□□ -2.41
TDA2P40045 YDR114CYDR114C 303 nt-0.01□□□□□ -2.41
TDA2P40045 UPS1YLR193C 528 nt-0.01□□□□□ -2.41
TDA2P40045 YOR108C-AYOR108C-A 210 nt-0.01□□□□□ -2.41
TDA2P40045 YDL152WYDL152W 366 nt-0.02□□□□□ -2.41
TDA2P40045 YDR182W-AYDR182W-A 204 nt-0.02□□□□□ -2.41
TDA2P40045 CMS1YLR003C 876 nt-0.02□□□□□ -2.41
TDA2P40045 GIM5YML094W 492 nt-0.02□□□□□ -2.41
TDA2P40045 UTP20YBL004W 7482 nt-0.03□□□□□ -2.41
TDA2P40045 YNL054W-BYNL054W-B 5250 nt-0.03□□□□□ -2.41
TDA2P40045 PMP1YCR024C-A 123 nt-0.03□□□□□ -2.41
TDA2P40045 YKL145W-AYKL145W-A 93 nt-0.03□□□□□ -2.41
TDA2P40045 YMR158C-AYMR158C-A 138 nt-0.03□□□□□ -2.41
TDA2P40045 RRT1YBL048W 312 nt-0.03□□□□□ -2.41
TDA2P40045 AI1Q0050 2505 nt-0.03□□□□□ -2.41
TDA2P40045 PET111YMR257C 2403 nt-0.04□□□□□ -2.42
TDA2P40045 NOP9YJL010C 2001 nt-0.04□□□□□ -2.42
TDA2P40045 SPO23YBR250W 1572 nt-0.04□□□□□ -2.42
TDA2P40045 COG4YPR105C 2586 nt-0.04□□□□□ -2.42
TDA2P40045 RPL9AYGL147C 576 nt-0.05□□□□□ -2.42
TDA2P40045 COX7YMR256C 183 nt-0.05□□□□□ -2.42
TDA2P40045 snR34snR34 203 nt-0.05□□□□□ -2.42
TDA2P40045 VIK1YPL253C 1944 nt-0.05□□□□□ -2.42
TDA2P40045 snR59snR59 78 nt-0.06□□□□□ -2.42
TDA2P40045 snR84snR84 550 nt-0.06□□□□□ -2.42
TDA2P40045 YOR053WYOR053W 342 nt-0.06□□□□□ -2.42
TDA2P40045 LOA1YPR139C 903 nt-0.06□□□□□ -2.42
TDA2P40045 DAD1YDR016C 285 nt-0.07□□□□□ -2.42
TDA2P40045 YDR344CYDR344C 444 nt-0.07□□□□□ -2.42
TDA2P40045 RPS30AYLR287C-A 192 nt-0.07□□□□□ -2.42
TDA2P40045 IQG1YPL242C 4488 nt-0.07□□□□□ -2.42
TDA2P40045 IRC2YDR112W 309 nt-0.08□□□□□ -2.42
TDA2P40045 RSM27YGR215W 333 nt-0.08□□□□□ -2.42
TDA2P40045 YGR290WYGR290W 444 nt-0.08□□□□□ -2.42
TDA2P40045 YJL127W-AYJL127W-A 117 nt-0.08□□□□□ -2.42
TDA2P40045 YLR252WYLR252W 306 nt-0.08□□□□□ -2.42
TDA2P40045 YMR153C-AYMR153C-A 336 nt-0.08□□□□□ -2.42
TDA2P40045 RPL32YBL092W 393 nt-0.08□□□□□ -2.42
TDA2P40045 YJR003CYJR003C 1560 nt-0.08□□□□□ -2.42
TDA2P40045 PRP5YBR237W 2550 nt-0.08□□□□□ -2.42
TDA2P40045 BIG1YHR101C 1008 nt-0.09□□□□□ -2.42
TDA2P40045 RCN2YOR220W 798 nt-0.09□□□□□ -2.42
TDA2P40045 PAN3YKL025C 2040 nt-0.09□□□□□ -2.42
TDA2P40045 ENV11YGR071C 2583 nt-0.1□□□□□ -2.43
TDA2P40045 SPO11YHL022C 1197 nt-0.1□□□□□ -2.43
TDA2P40045 YJR140W-AYJR140W-A 150 nt-0.1□□□□□ -2.43
TDA2P40045 RPL26AYLR344W 384 nt-0.1□□□□□ -2.43
TDA2P40045 snR13snR13 124 nt-0.1□□□□□ -2.43
TDA2P40045 YPL119C-AYPL119C-A 264 nt-0.1□□□□□ -2.43
TDA2P40045 YPR099CYPR099C 357 nt-0.1□□□□□ -2.43
TDA2P40045 ESP1YGR098C 4893 nt-0.11□□□□□ -2.43
TDA2P40045 QCR7YDR529C 384 nt-0.11□□□□□ -2.43
TDA2P40045 tT(UGU)Q1tT(UGU)Q1 76 nt-0.11□□□□□ -2.43
TDA2P40045 TYE7YOR344C 876 nt-0.11□□□□□ -2.43
TDA2P40045 snR190snR190 190 nt-0.11□□□□□ -2.43
TDA2P40045 BIR1YJR089W 2865 nt-0.12□□□□□ -2.43
TDA2P40045 YER158W-AYER158W-A 216 nt-0.12□□□□□ -2.43
TDA2P40045 VMA21YGR105W 234 nt-0.12□□□□□ -2.43
TDA2P40045 RPC10YHR143W-A 213 nt-0.12□□□□□ -2.43
TDA2P40045 YLL032CYLL032C 2478 nt-0.13□□□□□ -2.43
TDA2P40045 NPC2YDL046W 522 nt-0.13□□□□□ -2.43
TDA2P40045 YDR008CYDR008C 351 nt-0.13□□□□□ -2.43
TDA2P40045 UBC7YMR022W 498 nt-0.13□□□□□ -2.43
TDA2P40045 YOL106WYOL106W 354 nt-0.13□□□□□ -2.43
TDA2P40045 CDC33YOL139C 642 nt-0.13□□□□□ -2.43
TDA2P40045 YBR071WYBR071W 636 nt-0.13□□□□□ -2.43
TDA2P40045 YBR121C-AYBR121C-A 159 nt-0.13□□□□□ -2.43
TDA2P40045 MLP1YKR095W 5628 nt-0.13□□□□□ -2.43
TDA2P40045 STE5YDR103W 2754 nt-0.13□□□□□ -2.43
TDA2P40045 YOR192C-BYOR192C-B 5313 nt-0.14□□□□□ -2.43
TDA2P40045 YFR057WYFR057W 456 nt-0.14□□□□□ -2.43
TDA2P40045 BSC3YLR465C 309 nt-0.14□□□□□ -2.43
TDA2P40045 WIP1YDR374W-A 270 nt-0.15□□□□□ -2.43
TDA2P40045 YHR050W-AYHR050W-A 171 nt-0.15□□□□□ -2.43
TDA2P40045 MRPL31YKL138C 396 nt-0.15□□□□□ -2.43
TDA2P40045 YLR232WYLR232W 348 nt-0.15□□□□□ -2.43
TDA2P40045 RPS30BYOR182C 192 nt-0.15□□□□□ -2.43
TDA2P40045 PRP42YDR235W 1635 nt-0.16□□□□□ -2.43
TDA2P40045 RPL22BYFL034C-A 369 nt-0.16□□□□□ -2.44
TDA2P40045 GPG1YGL121C 381 nt-0.16□□□□□ -2.44
TDA2P40045 YHL042WYHL042W 453 nt-0.16□□□□□ -2.44
TDA2P40045 YOR364WYOR364W 369 nt-0.16□□□□□ -2.44
TDA2P40045 FYV10YIL097W 1551 nt-0.16□□□□□ -2.44
TDA2P40045 PKH2YOL100W 3246 nt-0.16□□□□□ -2.44
TDA2P40045 TDA2YER071C 381 nt-0.17□□□□□ -2.44
TDA2P40045 ACF4YJR083C 930 nt-0.17□□□□□ -2.44
TDA2P40045 YKL111CYKL111C 336 nt-0.17□□□□□ -2.44
TDA2P40045 MRPL50YNR022C 420 nt-0.17□□□□□ -2.44
TDA2P40045 COG8YML071C 1824 nt-0.17□□□□□ -2.44
TDA2P40045 RRI2YOL117W 1938 nt-0.19□□□□□ -2.44
TDA2P40045 SSS1YDR086C 243 nt-0.19□□□□□ -2.44
TDA2P40045 YHR054CYHR054C 1065 nt-0.19□□□□□ -2.44
TDA2P40045 YMR075C-AYMR075C-A 366 nt-0.19□□□□□ -2.44
TDA2P40045 YMR304C-AYMR304C-A 351 nt-0.19□□□□□ -2.44
TDA2P40045 LOC1YFR001W 615 nt-0.2□□□□□ -2.44
TDA2P40045 SPO13YHR014W 876 nt-0.2□□□□□ -2.44
TDA2P40045 LRP1YHR081W 555 nt-0.2□□□□□ -2.44
TDA2P40045 YLR146W-AYLR146W-A 189 nt-0.2□□□□□ -2.44
TDA2P40045 YPL197CYPL197C 414 nt-0.2□□□□□ -2.44
Retrieved 100 of 7,029 protein–RNA pairs in 19.8 ms