Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCND1P24385 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.24■□□□□ 0.83
CCND1P24385 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCND1P24385 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCND1P24385 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.24■□□□□ 0.83
CCND1P24385 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCND1P24385 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
CCND1P24385 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CCND1P24385 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.24■□□□□ 0.83
CCND1P24385 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCND1P24385 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CCND1P24385 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCND1P24385 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.24■□□□□ 0.83
CCND1P24385 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CCND1P24385 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
CCND1P24385 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCND1P24385 AC020907.5-201ENST00000624372 1936 ntBASIC20.23■□□□□ 0.83
CCND1P24385 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCND1P24385 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.23■□□□□ 0.83
CCND1P24385 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCND1P24385 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CCND1P24385 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
CCND1P24385 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CCND1P24385 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCND1P24385 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.23■□□□□ 0.83
CCND1P24385 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCND1P24385 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCND1P24385 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.23■□□□□ 0.83
CCND1P24385 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.23■□□□□ 0.83
CCND1P24385 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCND1P24385 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.23■□□□□ 0.83
CCND1P24385 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CCND1P24385 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.22■□□□□ 0.83
CCND1P24385 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCND1P24385 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.22■□□□□ 0.83
CCND1P24385 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCND1P24385 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCND1P24385 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.22■□□□□ 0.83
CCND1P24385 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCND1P24385 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCND1P24385 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCND1P24385 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCND1P24385 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCND1P24385 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCND1P24385 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCND1P24385 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCND1P24385 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCND1P24385 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCND1P24385 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.22■□□□□ 0.83
CCND1P24385 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.21■□□□□ 0.83
CCND1P24385 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.21■□□□□ 0.83
CCND1P24385 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCND1P24385 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCND1P24385 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCND1P24385 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.21■□□□□ 0.83
CCND1P24385 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCND1P24385 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.21■□□□□ 0.83
CCND1P24385 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCND1P24385 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.21■□□□□ 0.83
CCND1P24385 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.21■□□□□ 0.83
CCND1P24385 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCND1P24385 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCND1P24385 SLC7A5P1-201ENST00000568957 537 ntBASIC20.21■□□□□ 0.83
CCND1P24385 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCND1P24385 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.21■□□□□ 0.83
CCND1P24385 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCND1P24385 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCND1P24385 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CCND1P24385 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCND1P24385 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCND1P24385 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCND1P24385 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCND1P24385 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCND1P24385 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.2■□□□□ 0.82
CCND1P24385 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.2■□□□□ 0.82
CCND1P24385 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCND1P24385 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCND1P24385 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CCND1P24385 KRT18P5-201ENST00000436075 1291 ntBASIC20.2■□□□□ 0.82
CCND1P24385 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.2■□□□□ 0.82
CCND1P24385 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.2■□□□□ 0.82
CCND1P24385 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCND1P24385 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCND1P24385 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCND1P24385 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CCND1P24385 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCND1P24385 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCND1P24385 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CCND1P24385 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCND1P24385 AL162377.1-201ENST00000618844 1793 ntBASIC20.19■□□□□ 0.82
CCND1P24385 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.19■□□□□ 0.82
CCND1P24385 KRT18P61-201ENST00000585825 1298 ntBASIC20.19■□□□□ 0.82
CCND1P24385 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CCND1P24385 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.19■□□□□ 0.82
CCND1P24385 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.19■□□□□ 0.82
CCND1P24385 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.19■□□□□ 0.82
CCND1P24385 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCND1P24385 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.19■□□□□ 0.82
CCND1P24385 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCND1P24385 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms