Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCN2BO60939 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCN2BO60939 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
SCN2BO60939 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCN2BO60939 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.12■□□□□ 0.65
SCN2BO60939 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCN2BO60939 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
SCN2BO60939 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.12■□□□□ 0.65
SCN2BO60939 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.12■□□□□ 0.65
SCN2BO60939 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCN2BO60939 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCN2BO60939 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.12■□□□□ 0.65
SCN2BO60939 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.12■□□□□ 0.65
SCN2BO60939 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.12■□□□□ 0.65
SCN2BO60939 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.12■□□□□ 0.65
SCN2BO60939 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SCN2BO60939 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCN2BO60939 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.11■□□□□ 0.65
SCN2BO60939 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.11■□□□□ 0.65
SCN2BO60939 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
SCN2BO60939 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCN2BO60939 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCN2BO60939 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCN2BO60939 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCN2BO60939 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCN2BO60939 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCN2BO60939 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.11■□□□□ 0.65
SCN2BO60939 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SCN2BO60939 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SCN2BO60939 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.11■□□□□ 0.65
SCN2BO60939 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.11■□□□□ 0.65
SCN2BO60939 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCN2BO60939 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.11■□□□□ 0.65
SCN2BO60939 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SCN2BO60939 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.11■□□□□ 0.65
SCN2BO60939 AL691432.2-201ENST00000607222 2038 ntBASIC19.11■□□□□ 0.65
SCN2BO60939 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCN2BO60939 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SCN2BO60939 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCN2BO60939 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.11■□□□□ 0.65
SCN2BO60939 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SCN2BO60939 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN2BO60939 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN2BO60939 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN2BO60939 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN2BO60939 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SCN2BO60939 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN2BO60939 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN2BO60939 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN2BO60939 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SCN2BO60939 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.1■□□□□ 0.65
SCN2BO60939 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN2BO60939 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.1■□□□□ 0.65
SCN2BO60939 TERF1P5-201ENST00000477545 1207 ntBASIC19.1■□□□□ 0.65
SCN2BO60939 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.1■□□□□ 0.65
SCN2BO60939 NTF6G-201ENST00000591094 616 ntBASIC19.1■□□□□ 0.65
SCN2BO60939 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SCN2BO60939 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN2BO60939 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
SCN2BO60939 BX119927.1-201ENST00000636596 1552 ntBASIC19.1■□□□□ 0.65
SCN2BO60939 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
SCN2BO60939 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.09■□□□□ 0.65
SCN2BO60939 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN2BO60939 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.09■□□□□ 0.65
SCN2BO60939 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN2BO60939 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.09■□□□□ 0.65
SCN2BO60939 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.09■□□□□ 0.65
SCN2BO60939 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.09■□□□□ 0.65
SCN2BO60939 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SCN2BO60939 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.09■□□□□ 0.65
SCN2BO60939 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
SCN2BO60939 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
SCN2BO60939 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SCN2BO60939 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.09■□□□□ 0.65
SCN2BO60939 AC097381.1-201ENST00000429019 1296 ntBASIC19.09■□□□□ 0.65
SCN2BO60939 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SCN2BO60939 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SCN2BO60939 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SCN2BO60939 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.09■□□□□ 0.65
SCN2BO60939 AC010536.3-201ENST00000620306 533 ntBASIC19.09■□□□□ 0.65
SCN2BO60939 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.09■□□□□ 0.65
SCN2BO60939 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN2BO60939 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN2BO60939 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN2BO60939 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SCN2BO60939 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SCN2BO60939 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SCN2BO60939 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN2BO60939 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN2BO60939 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN2BO60939 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.09■□□□□ 0.65
SCN2BO60939 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SCN2BO60939 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SCN2BO60939 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
SCN2BO60939 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
SCN2BO60939 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
SCN2BO60939 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
SCN2BO60939 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCN2BO60939 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
SCN2BO60939 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms