Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CTNND1O60716 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC23.68■■□□□ 1.38
CTNND1O60716 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC23.68■■□□□ 1.38
CTNND1O60716 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CTNND1O60716 AF186192.3-201ENST00000583427 947 ntBASIC23.68■■□□□ 1.38
CTNND1O60716 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CTNND1O60716 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CTNND1O60716 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CTNND1O60716 AC124283.5-201ENST00000624661 1809 ntBASIC23.68■■□□□ 1.38
CTNND1O60716 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
CTNND1O60716 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.68■■□□□ 1.38
CTNND1O60716 NBPF21P-201ENST00000425093 1451 ntBASIC23.68■■□□□ 1.38
CTNND1O60716 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
CTNND1O60716 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CTNND1O60716 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CTNND1O60716 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC23.67■■□□□ 1.38
CTNND1O60716 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CTNND1O60716 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC23.67■■□□□ 1.38
CTNND1O60716 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CTNND1O60716 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC23.67■■□□□ 1.38
CTNND1O60716 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC23.67■■□□□ 1.38
CTNND1O60716 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC23.67■■□□□ 1.38
CTNND1O60716 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC23.67■■□□□ 1.38
CTNND1O60716 AC026471.5-201ENST00000615068 467 ntBASIC23.67■■□□□ 1.38
CTNND1O60716 AC097493.4-201ENST00000641197 219 ntBASIC23.67■■□□□ 1.38
CTNND1O60716 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC23.67■■□□□ 1.38
CTNND1O60716 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC23.67■■□□□ 1.38
CTNND1O60716 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CTNND1O60716 HTR7P1-201ENST00000538670 1336 ntBASIC23.66■■□□□ 1.38
CTNND1O60716 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC23.66■■□□□ 1.38
CTNND1O60716 Z98882.1-201ENST00000622160 2253 ntBASIC23.66■■□□□ 1.38
CTNND1O60716 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.66■■□□□ 1.38
CTNND1O60716 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.66■■□□□ 1.38
CTNND1O60716 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
CTNND1O60716 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CTNND1O60716 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC23.66■■□□□ 1.38
CTNND1O60716 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC23.66■■□□□ 1.38
CTNND1O60716 GRAP-204ENST00000573099 846 ntTSL 3 BASIC23.66■■□□□ 1.38
CTNND1O60716 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC23.66■■□□□ 1.38
CTNND1O60716 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CTNND1O60716 AC012306.2-201ENST00000609350 630 ntBASIC23.66■■□□□ 1.38
CTNND1O60716 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.66■■□□□ 1.38
CTNND1O60716 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CTNND1O60716 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CTNND1O60716 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CTNND1O60716 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC23.65■■□□□ 1.38
CTNND1O60716 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CTNND1O60716 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CTNND1O60716 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC23.65■■□□□ 1.38
CTNND1O60716 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
CTNND1O60716 TREX2-204ENST00000370212 861 ntTSL 5 BASIC23.65■■□□□ 1.38
CTNND1O60716 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
CTNND1O60716 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
CTNND1O60716 AL353807.1-201ENST00000427475 662 ntBASIC23.65■■□□□ 1.38
CTNND1O60716 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
CTNND1O60716 F2R-202ENST00000505600 442 ntTSL 2 BASIC23.65■■□□□ 1.38
CTNND1O60716 KRT18P21-201ENST00000515767 1272 ntBASIC23.65■■□□□ 1.38
CTNND1O60716 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.65■■□□□ 1.38
CTNND1O60716 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CTNND1O60716 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC23.65■■□□□ 1.38
CTNND1O60716 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC23.65■■□□□ 1.38
CTNND1O60716 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CTNND1O60716 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.65■■□□□ 1.38
CTNND1O60716 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CTNND1O60716 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CTNND1O60716 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
CTNND1O60716 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
CTNND1O60716 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC23.64■■□□□ 1.38
CTNND1O60716 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
CTNND1O60716 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC23.64■■□□□ 1.37
CTNND1O60716 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CTNND1O60716 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC23.64■■□□□ 1.37
CTNND1O60716 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC23.64■■□□□ 1.37
CTNND1O60716 AP003071.4-201ENST00000562276 1284 ntBASIC23.64■■□□□ 1.37
CTNND1O60716 RPS15-203ENST00000586096 570 ntTSL 2 BASIC23.64■■□□□ 1.37
CTNND1O60716 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC23.64■■□□□ 1.37
CTNND1O60716 AC010331.1-201ENST00000611423 582 ntBASIC23.64■■□□□ 1.37
CTNND1O60716 AL121906.2-201ENST00000621597 723 ntBASIC23.64■■□□□ 1.37
CTNND1O60716 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CTNND1O60716 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CTNND1O60716 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CTNND1O60716 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
CTNND1O60716 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CTNND1O60716 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CTNND1O60716 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
CTNND1O60716 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CTNND1O60716 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CTNND1O60716 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC23.63■■□□□ 1.37
CTNND1O60716 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC23.63■■□□□ 1.37
CTNND1O60716 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
CTNND1O60716 CD177P1-201ENST00000606252 935 ntBASIC23.63■■□□□ 1.37
CTNND1O60716 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CTNND1O60716 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC23.63■■□□□ 1.37
CTNND1O60716 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CTNND1O60716 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
CTNND1O60716 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CTNND1O60716 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CTNND1O60716 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CTNND1O60716 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CTNND1O60716 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms