Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GMDSO60547 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
GMDSO60547 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GMDSO60547 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GMDSO60547 AL512408.1-201ENST00000569378 2000 ntBASIC17.79■□□□□ 0.44
GMDSO60547 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.79■□□□□ 0.44
GMDSO60547 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
GMDSO60547 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
GMDSO60547 AL162377.1-201ENST00000618844 1793 ntBASIC17.79■□□□□ 0.44
GMDSO60547 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GMDSO60547 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
GMDSO60547 AC098818.2-201ENST00000564925 2320 ntBASIC17.78■□□□□ 0.44
GMDSO60547 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
GMDSO60547 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
GMDSO60547 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
GMDSO60547 AC018445.3-201ENST00000624177 1945 ntBASIC17.78■□□□□ 0.44
GMDSO60547 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
GMDSO60547 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GMDSO60547 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GMDSO60547 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
GMDSO60547 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
GMDSO60547 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
GMDSO60547 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
GMDSO60547 AC007225.1-201ENST00000566331 1836 ntBASIC17.78■□□□□ 0.44
GMDSO60547 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
GMDSO60547 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.78■□□□□ 0.44
GMDSO60547 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.78■□□□□ 0.44
GMDSO60547 KRT18P61-201ENST00000585825 1298 ntBASIC17.78■□□□□ 0.44
GMDSO60547 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.78■□□□□ 0.44
GMDSO60547 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.78■□□□□ 0.44
GMDSO60547 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.78■□□□□ 0.44
GMDSO60547 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.78■□□□□ 0.44
GMDSO60547 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
GMDSO60547 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GMDSO60547 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
GMDSO60547 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
GMDSO60547 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GMDSO60547 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GMDSO60547 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GMDSO60547 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
GMDSO60547 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GMDSO60547 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GMDSO60547 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
GMDSO60547 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.77■□□□□ 0.44
GMDSO60547 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GMDSO60547 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GMDSO60547 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.77■□□□□ 0.44
GMDSO60547 MIR935-201ENST00000401179 91 ntBASIC17.77■□□□□ 0.44
GMDSO60547 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
GMDSO60547 AC245052.3-201ENST00000450182 901 ntBASIC17.77■□□□□ 0.44
GMDSO60547 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GMDSO60547 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.77■□□□□ 0.44
GMDSO60547 SLC7A5P2-201ENST00000553010 536 ntBASIC17.77■□□□□ 0.44
GMDSO60547 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.77■□□□□ 0.44
GMDSO60547 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GMDSO60547 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.77■□□□□ 0.44
GMDSO60547 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GMDSO60547 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GMDSO60547 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
GMDSO60547 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GMDSO60547 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GMDSO60547 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
GMDSO60547 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
GMDSO60547 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GMDSO60547 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GMDSO60547 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.76■□□□□ 0.43
GMDSO60547 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GMDSO60547 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GMDSO60547 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
GMDSO60547 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
GMDSO60547 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GMDSO60547 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GMDSO60547 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.76■□□□□ 0.43
GMDSO60547 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GMDSO60547 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.76■□□□□ 0.43
GMDSO60547 KRT18P11-201ENST00000435214 1283 ntBASIC17.76■□□□□ 0.43
GMDSO60547 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.76■□□□□ 0.43
GMDSO60547 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.76■□□□□ 0.43
GMDSO60547 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GMDSO60547 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GMDSO60547 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
GMDSO60547 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
GMDSO60547 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.75■□□□□ 0.43
GMDSO60547 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GMDSO60547 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.75■□□□□ 0.43
GMDSO60547 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GMDSO60547 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GMDSO60547 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
GMDSO60547 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GMDSO60547 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
GMDSO60547 AC099778.1-201ENST00000568593 1911 ntBASIC17.75■□□□□ 0.43
GMDSO60547 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GMDSO60547 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.75■□□□□ 0.43
GMDSO60547 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
GMDSO60547 AL162430.1-201ENST00000480705 870 ntBASIC17.75■□□□□ 0.43
GMDSO60547 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.75■□□□□ 0.43
GMDSO60547 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.75■□□□□ 0.43
GMDSO60547 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GMDSO60547 RARRES2P11-201ENST00000635158 484 ntBASIC17.75■□□□□ 0.43
GMDSO60547 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms