Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC22.26■■□□□ 1.15
TRIM49BA6NDI0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
TRIM49BA6NDI0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM49BA6NDI0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM49BA6NDI0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM49BA6NDI0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM49BA6NDI0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC22.26■■□□□ 1.15
TRIM49BA6NDI0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
TRIM49BA6NDI0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM49BA6NDI0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM49BA6NDI0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
TRIM49BA6NDI0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM49BA6NDI0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM49BA6NDI0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC22.25■■□□□ 1.15
TRIM49BA6NDI0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
TRIM49BA6NDI0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM49BA6NDI0 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC22.25■■□□□ 1.15
TRIM49BA6NDI0 AL162412.1-201ENST00000567129 965 ntBASIC22.25■■□□□ 1.15
TRIM49BA6NDI0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC22.25■■□□□ 1.15
TRIM49BA6NDI0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM49BA6NDI0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM49BA6NDI0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM49BA6NDI0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC22.25■■□□□ 1.15
TRIM49BA6NDI0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM49BA6NDI0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM49BA6NDI0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC22.24■■□□□ 1.15
TRIM49BA6NDI0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
TRIM49BA6NDI0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC22.24■■□□□ 1.15
TRIM49BA6NDI0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRIM49BA6NDI0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC22.24■■□□□ 1.15
TRIM49BA6NDI0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.24■■□□□ 1.15
TRIM49BA6NDI0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRIM49BA6NDI0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRIM49BA6NDI0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRIM49BA6NDI0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
TRIM49BA6NDI0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRIM49BA6NDI0 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TRIM49BA6NDI0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TRIM49BA6NDI0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRIM49BA6NDI0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TRIM49BA6NDI0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TRIM49BA6NDI0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRIM49BA6NDI0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC22.23■■□□□ 1.15
TRIM49BA6NDI0 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRIM49BA6NDI0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRIM49BA6NDI0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRIM49BA6NDI0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.23■■□□□ 1.15
TRIM49BA6NDI0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22.23■■□□□ 1.15
TRIM49BA6NDI0 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TRIM49BA6NDI0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.23■■□□□ 1.15
TRIM49BA6NDI0 BX119927.1-201ENST00000636596 1552 ntBASIC22.23■■□□□ 1.15
TRIM49BA6NDI0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TRIM49BA6NDI0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRIM49BA6NDI0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRIM49BA6NDI0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRIM49BA6NDI0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRIM49BA6NDI0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TRIM49BA6NDI0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRIM49BA6NDI0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRIM49BA6NDI0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
TRIM49BA6NDI0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRIM49BA6NDI0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRIM49BA6NDI0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC22.22■■□□□ 1.15
TRIM49BA6NDI0 RARRES2P4-201ENST00000514074 484 ntBASIC22.22■■□□□ 1.15
TRIM49BA6NDI0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC22.22■■□□□ 1.15
TRIM49BA6NDI0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC22.22■■□□□ 1.15
TRIM49BA6NDI0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRIM49BA6NDI0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRIM49BA6NDI0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
TRIM49BA6NDI0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRIM49BA6NDI0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC22.21■■□□□ 1.15
TRIM49BA6NDI0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC22.21■■□□□ 1.15
TRIM49BA6NDI0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRIM49BA6NDI0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRIM49BA6NDI0 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.21■■□□□ 1.15
TRIM49BA6NDI0 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.21■■□□□ 1.15
TRIM49BA6NDI0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.21■■□□□ 1.15
TRIM49BA6NDI0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRIM49BA6NDI0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC22.21■■□□□ 1.15
TRIM49BA6NDI0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRIM49BA6NDI0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TRIM49BA6NDI0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC22.21■■□□□ 1.15
TRIM49BA6NDI0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRIM49BA6NDI0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TRIM49BA6NDI0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRIM49BA6NDI0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRIM49BA6NDI0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.15
TRIM49BA6NDI0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC22.2■■□□□ 1.15
TRIM49BA6NDI0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM49BA6NDI0 PGM5P4-201ENST00000421970 445 ntBASIC22.2■■□□□ 1.14
TRIM49BA6NDI0 CYP2T1P-201ENST00000432607 1285 ntBASIC22.2■■□□□ 1.14
TRIM49BA6NDI0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
TRIM49BA6NDI0 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
TRIM49BA6NDI0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
TRIM49BA6NDI0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
TRIM49BA6NDI0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC22.2■■□□□ 1.14
TRIM49BA6NDI0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM49BA6NDI0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM49BA6NDI0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC22.2■■□□□ 1.14
TRIM49BA6NDI0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms