Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 ABCF2P1-201ENST00000465687 1867 ntBASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 AL591543.1-202ENST00000642095 4149 ntBASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 MAPK10-279ENST00000641157 2449 ntBASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 CCNB2-205ENST00000621385 2503 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 AC003684.1-201ENST00000432442 1715 ntTSL 2 BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 LRRC31-204ENST00000523069 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 SOX6-210ENST00000528252 2707 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 RIT2-201ENST00000326695 1092 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 SNORA30-201ENST00000384028 129 ntBASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 IGLV3-12-201ENST00000390313 356 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 RPL37-205ENST00000509877 637 ntTSL 5 BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 AC044839.1-209ENST00000529769 878 ntTSL 5 BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 SCARNA9-201ENST00000530422 353 ntBASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 TMBIM6-225ENST00000552370 882 ntAPPRIS P3 TSL 5 BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 CRTC3-AS1-201ENST00000558105 502 ntTSL 5 BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 CCDC32-210ENST00000559911 677 ntTSL 5 BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 CCDC32-212ENST00000560305 557 ntTSL 4 BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 AC073657.1-202ENST00000562063 334 ntTSL 3 BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 MT1L-202ENST00000566367 78 ntBASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 AL158211.1-201ENST00000566763 763 ntBASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 RIT2-202ENST00000589109 1156 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 AC005387.1-201ENST00000597837 352 ntTSL 3 BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 AP000436.1-201ENST00000605239 800 ntBASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 U1.22-201ENST00000605806 164 ntBASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 RN7SL715P-201ENST00000606972 286 ntBASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 AP004247.4-201ENST00000608484 942 ntBASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 7SK.12-201ENST00000612820 244 ntBASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 AC243830.3-201ENST00000616810 376 ntBASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 MIR6761-201ENST00000617899 72 ntBASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 LAX1-202ENST00000367217 1356 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 FBXO11-202ENST00000403359 4055 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 Z97832.2-201ENST00000605896 4261 ntBASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 NUDT4-206ENST00000549992 3607 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 ZEB2-205ENST00000419938 1755 ntTSL 2 BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 AC104083.1-201ENST00000569449 2615 ntBASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 AC093616.1-201ENST00000427434 2095 ntBASIC8.3□□□□□ -1.08
CDK5RAP1Q96SZ6 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 LINC01194-202ENST00000505877 1319 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 AC011447.6-201ENST00000623510 2598 ntBASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 NOLC1-209ENST00000605788 3932 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 ZNF655-222ENST00000493277 1815 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 AC020895.2-201ENST00000624996 1839 ntBASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 NBPF25P-201ENST00000606775 2019 ntBASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 NLRP3-206ENST00000391828 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 BTN2A1-201ENST00000312541 2920 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 BTN2A1-203ENST00000429381 3113 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 CD44-205ENST00000352818 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 DYNLRB1-202ENST00000357156 675 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 SNORA7B-201ENST00000384360 139 ntBASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 PHBP1-201ENST00000392260 808 ntBASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 RPL5P35-201ENST00000398869 816 ntBASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 AL080285.1-201ENST00000404225 984 ntBASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 LINC00851-201ENST00000423033 727 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 AKR1B15-201ENST00000423958 1035 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 RPL4P2-201ENST00000447259 1282 ntBASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 AL451074.1-202ENST00000453762 989 ntBASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 AC109454.1-201ENST00000471205 498 ntBASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 IGHV7-40-201ENST00000520963 296 ntBASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 AP000445.1-201ENST00000526692 741 ntBASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 LINC02132-201ENST00000598933 750 ntTSL 2 BASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 AC005520.3-201ENST00000602874 370 ntBASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 AL353608.4-201ENST00000624487 1188 ntBASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 TMEM45A-201ENST00000323523 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 IKZF3-207ENST00000377944 1669 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 IKZF3-208ENST00000377945 1696 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms