Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 PET100-201ENST00000456958 219 ntTSL 2 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 RN7SL706P-201ENST00000460079 292 ntBASIC7.38□□□□□ -1.23
SNX18Q96RF0 KRT18P51-201ENST00000504966 746 ntBASIC7.38□□□□□ -1.23
SNX18Q96RF0 AC112203.1-201ENST00000506315 1020 ntBASIC7.38□□□□□ -1.23
SNX18Q96RF0 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 LINC01944-201ENST00000517916 416 ntTSL 3 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 AC103769.1-201ENST00000518507 283 ntTSL 3 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 IGKV3D-31-201ENST00000519131 281 ntBASIC7.38□□□□□ -1.23
SNX18Q96RF0 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 AC006518.1-201ENST00000541449 943 ntBASIC7.38□□□□□ -1.23
SNX18Q96RF0 AC024257.1-201ENST00000547523 566 ntTSL 4 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 TMEM106C-212ENST00000549288 321 ntTSL 3 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 AC016954.1-201ENST00000549976 745 ntBASIC7.38□□□□□ -1.23
SNX18Q96RF0 AC084033.1-201ENST00000550830 633 ntBASIC7.38□□□□□ -1.23
SNX18Q96RF0 AC005479.1-201ENST00000554629 451 ntBASIC7.38□□□□□ -1.23
SNX18Q96RF0 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 AC116348.1-201ENST00000562525 528 ntTSL 3 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 SNHG19-201ENST00000563192 342 ntTSL 2 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 ANP32BP1-201ENST00000564205 1297 ntBASIC7.38□□□□□ -1.23
SNX18Q96RF0 ARPP19-213ENST00000569723 550 ntTSL 4 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 GNAS-AS1_2.1-201ENST00000613404 114 ntBASIC7.38□□□□□ -1.23
SNX18Q96RF0 AL354950.1-201ENST00000614150 568 ntBASIC7.38□□□□□ -1.23
SNX18Q96RF0 AC124319.3-201ENST00000616832 526 ntBASIC7.38□□□□□ -1.23
SNX18Q96RF0 AL662791.5-201ENST00000623334 466 ntTSL 3 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 AL132796.3-201ENST00000624703 900 ntBASIC7.38□□□□□ -1.23
SNX18Q96RF0 PGAM1P5-203ENST00000626376 313 ntTSL 5 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 LDAH-201ENST00000237822 2907 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SNX18Q96RF0 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SNX18Q96RF0 TMEM182-203ENST00000412401 3593 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SNX18Q96RF0 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SNX18Q96RF0 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
SNX18Q96RF0 GBP7-201ENST00000294671 2454 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SNX18Q96RF0 ACTR6-209ENST00000551617 1715 ntTSL 5 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 AC104162.1-201ENST00000430831 2382 ntBASIC7.38□□□□□ -1.23
SNX18Q96RF0 CTAGE11P-201ENST00000451540 2353 ntBASIC7.38□□□□□ -1.23
SNX18Q96RF0 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 AC105046.1-201ENST00000566457 4997 ntBASIC7.38□□□□□ -1.23
SNX18Q96RF0 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SNX18Q96RF0 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SNX18Q96RF0 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
SNX18Q96RF0 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SNX18Q96RF0 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SNX18Q96RF0 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
SNX18Q96RF0 LMO3-212ENST00000535535 1488 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
SNX18Q96RF0 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC7.37□□□□□ -1.23
SNX18Q96RF0 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SNX18Q96RF0 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
SNX18Q96RF0 ASB15-205ENST00000451215 2956 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
SNX18Q96RF0 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC7.37□□□□□ -1.23
SNX18Q96RF0 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC7.37□□□□□ -1.23
SNX18Q96RF0 AC090984.1-201ENST00000623172 1332 ntBASIC7.37□□□□□ -1.23
SNX18Q96RF0 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SNX18Q96RF0 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SNX18Q96RF0 ODF1-201ENST00000285402 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SNX18Q96RF0 OR1G1-201ENST00000328890 998 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
SNX18Q96RF0 CLEC12B-201ENST00000338896 1097 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SNX18Q96RF0 CD44-205ENST00000352818 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
SNX18Q96RF0 Metazoa_SRP.2-201ENST00000359385 269 ntBASIC7.37□□□□□ -1.23
SNX18Q96RF0 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SNX18Q96RF0 MICU1-203ENST00000398763 1224 ntTSL 2 BASIC7.37□□□□□ -1.23
SNX18Q96RF0 SNORA73.3-201ENST00000410213 189 ntBASIC7.37□□□□□ -1.23
SNX18Q96RF0 RN7SKP152-201ENST00000410444 315 ntBASIC7.37□□□□□ -1.23
SNX18Q96RF0 AL807761.3-201ENST00000427833 329 ntTSL 3 BASIC7.37□□□□□ -1.23
SNX18Q96RF0 AL122003.1-201ENST00000435206 784 ntBASIC7.37□□□□□ -1.23
SNX18Q96RF0 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
SNX18Q96RF0 AC092431.2-201ENST00000441658 318 ntBASIC7.37□□□□□ -1.23
SNX18Q96RF0 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SNX18Q96RF0 FTH1P27-201ENST00000449509 551 ntBASIC7.37□□□□□ -1.23
SNX18Q96RF0 LINC01548-201ENST00000451980 696 ntTSL 5 BASIC7.37□□□□□ -1.23
SNX18Q96RF0 AL109809.3-201ENST00000456875 246 ntBASIC7.37□□□□□ -1.23
SNX18Q96RF0 AL049829.1-201ENST00000465411 156 ntBASIC7.37□□□□□ -1.23
SNX18Q96RF0 AC007547.2-201ENST00000468802 360 ntBASIC7.37□□□□□ -1.23
SNX18Q96RF0 RN7SL841P-201ENST00000470547 297 ntBASIC7.37□□□□□ -1.23
SNX18Q96RF0 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC7.37□□□□□ -1.23
SNX18Q96RF0 RN7SL239P-201ENST00000490061 300 ntBASIC7.37□□□□□ -1.23
SNX18Q96RF0 AC095050.1-201ENST00000502661 905 ntTSL 5 BASIC7.37□□□□□ -1.23
SNX18Q96RF0 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC7.37□□□□□ -1.23
SNX18Q96RF0 SNORA48.9-201ENST00000516419 162 ntBASIC7.37□□□□□ -1.23
SNX18Q96RF0 RNU6-362P-201ENST00000516736 90 ntBASIC7.37□□□□□ -1.23
SNX18Q96RF0 RNA5SP460-201ENST00000516789 100 ntBASIC7.37□□□□□ -1.23
SNX18Q96RF0 LINC02296-201ENST00000557070 544 ntTSL 4 BASIC7.37□□□□□ -1.23
SNX18Q96RF0 APOOP5-202ENST00000564761 566 ntBASIC7.37□□□□□ -1.23
SNX18Q96RF0 AC233699.1-201ENST00000569955 1168 ntBASIC7.37□□□□□ -1.23
SNX18Q96RF0 AC015818.5-201ENST00000578659 356 ntBASIC7.37□□□□□ -1.23
SNX18Q96RF0 AL021808.1-201ENST00000604325 1117 ntBASIC7.37□□□□□ -1.23
SNX18Q96RF0 AC139795.3-201ENST00000606358 541 ntBASIC7.37□□□□□ -1.23
SNX18Q96RF0 RNF219-AS1-213ENST00000607860 577 ntTSL 4 BASIC7.37□□□□□ -1.23
SNX18Q96RF0 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC7.37□□□□□ -1.23
SNX18Q96RF0 AC026468.1-201ENST00000614981 107 ntBASIC7.37□□□□□ -1.23
SNX18Q96RF0 AC079801.1-201ENST00000623753 388 ntTSL 3 BASIC7.37□□□□□ -1.23
SNX18Q96RF0 snoMe28S-Am2634.2-201ENST00000637869 80 ntBASIC7.37□□□□□ -1.23
SNX18Q96RF0 OR7A2P-202ENST00000641312 1219 ntBASIC7.37□□□□□ -1.23
SNX18Q96RF0 C2orf83-204ENST00000641422 291 ntAPPRIS ALT2 BASIC7.37□□□□□ -1.23
SNX18Q96RF0 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms