Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC7.42□□□□□ -1.22
SNX18Q96RF0 HNRNPA1P54-201ENST00000411857 9714 ntBASIC7.42□□□□□ -1.22
SNX18Q96RF0 ZEB2-205ENST00000419938 1755 ntTSL 2 BASIC7.42□□□□□ -1.22
SNX18Q96RF0 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC7.42□□□□□ -1.22
SNX18Q96RF0 HMGB1P39-201ENST00000366304 880 ntBASIC7.42□□□□□ -1.22
SNX18Q96RF0 S100A7-201ENST00000368722 442 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
SNX18Q96RF0 AL357084.1-201ENST00000407538 454 ntBASIC7.42□□□□□ -1.22
SNX18Q96RF0 NONOP2-201ENST00000414613 1231 ntBASIC7.42□□□□□ -1.22
SNX18Q96RF0 LINC01066-201ENST00000415283 399 ntTSL 3 BASIC7.42□□□□□ -1.22
SNX18Q96RF0 AL645937.5-202ENST00000415595 944 ntBASIC7.42□□□□□ -1.22
SNX18Q96RF0 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC7.42□□□□□ -1.22
SNX18Q96RF0 AC128709.3-201ENST00000420213 626 ntTSL 4 BASIC7.42□□□□□ -1.22
SNX18Q96RF0 AL136981.1-204ENST00000425090 461 ntTSL 3 BASIC7.42□□□□□ -1.22
SNX18Q96RF0 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC7.42□□□□□ -1.22
SNX18Q96RF0 AC073346.1-202ENST00000430610 544 ntTSL 3 BASIC7.42□□□□□ -1.22
SNX18Q96RF0 AL589990.1-201ENST00000432210 592 ntTSL 3 BASIC7.42□□□□□ -1.22
SNX18Q96RF0 AP002383.1-201ENST00000439405 720 ntBASIC7.42□□□□□ -1.22
SNX18Q96RF0 AL160408.4-201ENST00000441360 933 ntTSL 2 BASIC7.42□□□□□ -1.22
SNX18Q96RF0 AL138881.1-201ENST00000443445 789 ntTSL 3 BASIC7.42□□□□□ -1.22
SNX18Q96RF0 CHRM3-AS1-201ENST00000444721 486 ntTSL 2 BASIC7.42□□□□□ -1.22
SNX18Q96RF0 RPL35P4-201ENST00000446039 322 ntBASIC7.42□□□□□ -1.22
SNX18Q96RF0 AL451074.1-202ENST00000453762 989 ntBASIC7.42□□□□□ -1.22
SNX18Q96RF0 LINC00445-202ENST00000456848 643 ntTSL 3 BASIC7.42□□□□□ -1.22
SNX18Q96RF0 SCG5-206ENST00000494364 1148 ntTSL 5 BASIC7.42□□□□□ -1.22
SNX18Q96RF0 AC010834.3-201ENST00000520562 939 ntTSL 3 BASIC7.42□□□□□ -1.22
SNX18Q96RF0 RNF185-AS1-201ENST00000526089 353 ntBASIC7.42□□□□□ -1.22
SNX18Q96RF0 OR2AL1P-201ENST00000529862 507 ntBASIC7.42□□□□□ -1.22
SNX18Q96RF0 SAA3P-202ENST00000534768 642 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SNX18Q96RF0 GSG1-206ENST00000537302 1028 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SNX18Q96RF0 LINC02325-203ENST00000554862 733 ntTSL 4 BASIC7.42□□□□□ -1.22
SNX18Q96RF0 AC087639.1-201ENST00000560974 920 ntBASIC7.42□□□□□ -1.22
SNX18Q96RF0 AC027763.2-201ENST00000573755 539 ntTSL 4 BASIC7.42□□□□□ -1.22
SNX18Q96RF0 AC099684.3-201ENST00000574483 560 ntTSL 4 BASIC7.42□□□□□ -1.22
SNX18Q96RF0 AC015910.1-202ENST00000580264 633 ntTSL 5 BASIC7.42□□□□□ -1.22
SNX18Q96RF0 AC091147.1-201ENST00000583290 510 ntBASIC7.42□□□□□ -1.22
SNX18Q96RF0 AC007998.3-202ENST00000591141 697 ntTSL 3 BASIC7.42□□□□□ -1.22
SNX18Q96RF0 AC078899.4-201ENST00000593952 1113 ntBASIC7.42□□□□□ -1.22
SNX18Q96RF0 AL691432.1-202ENST00000597891 502 ntBASIC7.42□□□□□ -1.22
SNX18Q96RF0 MIR4435-2HG-217ENST00000604981 759 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SNX18Q96RF0 AC106782.6-201ENST00000611264 512 ntBASIC7.42□□□□□ -1.22
SNX18Q96RF0 AC108704.1-201ENST00000611714 744 ntBASIC7.42□□□□□ -1.22
SNX18Q96RF0 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC7.42□□□□□ -1.22
SNX18Q96RF0 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC7.42□□□□□ -1.22
SNX18Q96RF0 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.42□□□□□ -1.22
SNX18Q96RF0 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
SNX18Q96RF0 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SNX18Q96RF0 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SNX18Q96RF0 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC7.42□□□□□ -1.22
SNX18Q96RF0 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
SNX18Q96RF0 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SNX18Q96RF0 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.42□□□□□ -1.22
SNX18Q96RF0 GUCY2GP-201ENST00000479705 3222 ntBASIC7.42□□□□□ -1.22
SNX18Q96RF0 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
SNX18Q96RF0 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SNX18Q96RF0 BX322650.1-201ENST00000332359 2143 ntBASIC7.42□□□□□ -1.22
SNX18Q96RF0 PPIP5K2-202ENST00000358359 5813 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
SNX18Q96RF0 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SNX18Q96RF0 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.42□□□□□ -1.22
SNX18Q96RF0 CARF-216ENST00000444724 2854 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SNX18Q96RF0 ZNF812P-201ENST00000457674 1694 ntBASIC7.41□□□□□ -1.22
SNX18Q96RF0 CDC42SE2-208ENST00000505065 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SNX18Q96RF0 GANC-206ENST00000566442 2512 ntTSL 2 BASIC7.41□□□□□ -1.22
SNX18Q96RF0 ZNF613-201ENST00000293471 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SNX18Q96RF0 DCLRE1C-203ENST00000378242 1933 ntTSL 2 BASIC7.41□□□□□ -1.22
SNX18Q96RF0 SPINK6-201ENST00000325630 686 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SNX18Q96RF0 CLYBL-201ENST00000339105 1169 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SNX18Q96RF0 MAGOH-201ENST00000371466 500 ntTSL 2 BASIC7.41□□□□□ -1.22
SNX18Q96RF0 PSMD10-205ENST00000372295 779 ntTSL 5 BASIC7.41□□□□□ -1.22
SNX18Q96RF0 ARR3-202ENST00000374495 1298 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SNX18Q96RF0 IGLV11-55-201ENST00000390286 381 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
SNX18Q96RF0 SNORA57.2-201ENST00000391265 128 ntBASIC7.41□□□□□ -1.22
SNX18Q96RF0 MIR1296-201ENST00000408136 92 ntBASIC7.41□□□□□ -1.22
SNX18Q96RF0 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.41□□□□□ -1.22
SNX18Q96RF0 AC009500.1-201ENST00000420684 583 ntBASIC7.41□□□□□ -1.22
SNX18Q96RF0 AL359076.1-201ENST00000426860 420 ntTSL 3 BASIC7.41□□□□□ -1.22
SNX18Q96RF0 AL138957.1-201ENST00000435156 342 ntTSL 3 BASIC7.41□□□□□ -1.22
SNX18Q96RF0 AL590094.1-203ENST00000435649 828 ntTSL 5 BASIC7.41□□□□□ -1.22
SNX18Q96RF0 AL512637.1-201ENST00000439523 1231 ntBASIC7.41□□□□□ -1.22
SNX18Q96RF0 AC022400.2-201ENST00000446730 866 ntTSL 2 BASIC7.41□□□□□ -1.22
SNX18Q96RF0 AP1B1P1-202ENST00000448124 191 ntBASIC7.41□□□□□ -1.22
SNX18Q96RF0 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
SNX18Q96RF0 BUB3P1-201ENST00000458451 999 ntBASIC7.41□□□□□ -1.22
SNX18Q96RF0 RN7SL630P-201ENST00000483714 297 ntBASIC7.41□□□□□ -1.22
SNX18Q96RF0 GAPDHP22-201ENST00000491037 413 ntBASIC7.41□□□□□ -1.22
SNX18Q96RF0 RPL5P3-201ENST00000493817 889 ntBASIC7.41□□□□□ -1.22
SNX18Q96RF0 MLIP-209ENST00000509997 1032 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
SNX18Q96RF0 AC091901.1-201ENST00000517722 736 ntTSL 3 BASIC7.41□□□□□ -1.22
SNX18Q96RF0 AC022695.2-201ENST00000518042 768 ntTSL 3 BASIC7.41□□□□□ -1.22
SNX18Q96RF0 MED30-204ENST00000522839 476 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SNX18Q96RF0 AC011379.2-201ENST00000523154 583 ntTSL 4 BASIC7.41□□□□□ -1.22
SNX18Q96RF0 AC002428.1-201ENST00000523722 771 ntTSL 3 BASIC7.41□□□□□ -1.22
SNX18Q96RF0 AC087521.3-202ENST00000526408 743 ntTSL 5 BASIC7.41□□□□□ -1.22
SNX18Q96RF0 LINC02455-201ENST00000541881 496 ntTSL 3 BASIC7.41□□□□□ -1.22
SNX18Q96RF0 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
SNX18Q96RF0 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC7.41□□□□□ -1.22
SNX18Q96RF0 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC7.41□□□□□ -1.22
SNX18Q96RF0 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC7.41□□□□□ -1.22
SNX18Q96RF0 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC7.41□□□□□ -1.22
SNX18Q96RF0 RN7SL619P-201ENST00000581753 258 ntBASIC7.41□□□□□ -1.22
SNX18Q96RF0 SLC14A1-214ENST00000589700 1022 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms