Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MAP3K13-203ENST00000424227 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDK5RAP1Q96SZ6 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
CDK5RAP1Q96SZ6 UGT2B28-202ENST00000511240 1525 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 KDELC1P1-201ENST00000512118 1509 ntBASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 AC068044.1-201ENST00000441585 1978 ntBASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 XIST-206ENST00000434839 2865 ntTSL 5 BASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 TMEM169-201ENST00000295658 3342 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 SLC31A1-201ENST00000374212 4744 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 EPN2-204ENST00000395620 3860 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 BDNF-204ENST00000395980 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 RNF214-206ENST00000531452 2695 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 TRIM5-201ENST00000380027 2290 ntTSL 5 BASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 AMTN-201ENST00000339336 1037 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 SNORA71D-201ENST00000363484 134 ntBASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 IGKV3-15-201ENST00000390252 442 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 TRBV5-3-201ENST00000390362 343 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 CTSLP8-201ENST00000413075 967 ntBASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 OR2L1P-201ENST00000422727 938 ntBASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 AC004160.2-201ENST00000425837 563 ntTSL 4 BASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 AC092447.7-202ENST00000443198 580 ntTSL 2 BASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 LINC02024-203ENST00000496994 489 ntTSL 3 BASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 MTND2P31-201ENST00000512602 616 ntBASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 AC068134.3-201ENST00000513620 788 ntBASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 AC008708.2-201ENST00000522956 1124 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 ZNF345-205ENST00000526123 458 ntTSL 3 BASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 AP006437.1-202ENST00000530327 933 ntBASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 OR4C7P-201ENST00000533375 919 ntBASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 TEX26-AS1-211ENST00000589840 865 ntTSL 5 BASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 LINC01125-248ENST00000627284 700 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 AC106869.1-203ENST00000419035 1892 ntTSL 2 BASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 IKZF5-201ENST00000368886 4555 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 DARS2-201ENST00000361951 3506 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 AC123912.3-201ENST00000600907 1367 ntBASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 SCOC-AS1-201ENST00000512692 1987 ntTSL 2 BASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 AL391095.1-201ENST00000422519 2004 ntTSL 2 BASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 SCMH1-210ENST00000402904 3204 ntTSL 5 BASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 FMOD-201ENST00000354955 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CDK5RAP1Q96SZ6 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 MAP3K19-205ENST00000392917 1765 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 CCR3-208ENST00000545097 1786 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 IL24-202ENST00000367093 1819 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 NELL1-201ENST00000298925 3329 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 CCDC190-203ENST00000367912 2605 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 AFF1-211ENST00000544085 3644 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 AL390195.2-201ENST00000564771 2023 ntBASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 ZNF726-202ENST00000334589 847 ntTSL 3 BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 AC099066.1-201ENST00000428148 534 ntTSL 5 BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 PAICSP2-201ENST00000429118 1150 ntBASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 AP002383.1-201ENST00000439405 720 ntBASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 LYSMD1-202ENST00000440902 1003 ntTSL 2 BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 CSF2RA-217ENST00000494969 489 ntTSL 5 BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 AC008592.1-201ENST00000503091 665 ntTSL 3 BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 AC107959.3-202ENST00000523806 450 ntTSL 5 BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 AC019227.1-201ENST00000526902 510 ntBASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 LACRT-203ENST00000547511 504 ntAPPRIS ALT2 TSL 3 BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 MTATP6P25-201ENST00000574491 261 ntBASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 AC090699.1-201ENST00000586264 321 ntBASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 RN7SL3-201ENST00000610674 299 ntBASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 AC007221.2-201ENST00000634367 948 ntTSL 5 BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 ITIH3-202ENST00000449956 3007 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 HSD11B1-202ENST00000367027 1405 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 LINC00467-201ENST00000423222 3508 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 CCT6P2-201ENST00000507234 1593 ntBASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 ZBTB18-202ENST00000622512 3740 ntAPPRIS ALT1 TSL 3 BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 FMO5-203ENST00000441068 1696 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 ERGIC1-201ENST00000326654 3952 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 AL022334.1-201ENST00000417397 1726 ntBASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC8.43□□□□□ -1.06
CDK5RAP1Q96SZ6 AC124045.1-201ENST00000606008 1953 ntBASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 ABRAXAS1-201ENST00000321945 4291 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms