Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC8.77□□□□□ -1.01
UBE4BO95155 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
UBE4BO95155 GABRR1-202ENST00000435811 3106 ntTSL 2 BASIC8.77□□□□□ -1.01
UBE4BO95155 PSG9-203ENST00000291752 1055 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
UBE4BO95155 RIT2-201ENST00000326695 1092 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
UBE4BO95155 AC104699.1-201ENST00000352271 414 ntTSL 3 BASIC8.77□□□□□ -1.01
UBE4BO95155 MIR654-201ENST00000385199 81 ntBASIC8.77□□□□□ -1.01
UBE4BO95155 RN7SKP119-201ENST00000410753 273 ntBASIC8.77□□□□□ -1.01
UBE4BO95155 RPS6KA2-IT1-201ENST00000416770 579 ntTSL 3 BASIC8.77□□□□□ -1.01
UBE4BO95155 GGT3P-203ENST00000445651 368 ntTSL 2 BASIC8.77□□□□□ -1.01
UBE4BO95155 FGF12-206ENST00000450716 768 ntTSL 5 BASIC8.77□□□□□ -1.01
UBE4BO95155 KDM4A-AS1-205ENST00000453015 647 ntTSL 2 BASIC8.77□□□□□ -1.01
UBE4BO95155 SSU72P8-201ENST00000473520 585 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
UBE4BO95155 AC008638.2-201ENST00000503840 715 ntBASIC8.77□□□□□ -1.01
UBE4BO95155 AC114786.3-201ENST00000509304 705 ntBASIC8.77□□□□□ -1.01
UBE4BO95155 IGHVIII-82-201ENST00000522058 250 ntBASIC8.77□□□□□ -1.01
UBE4BO95155 AP000793.1-201ENST00000527364 740 ntTSL 3 BASIC8.77□□□□□ -1.01
UBE4BO95155 AP000435.1-201ENST00000528539 496 ntBASIC8.77□□□□□ -1.01
UBE4BO95155 PRR13-207ENST00000549581 838 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
UBE4BO95155 LRP1-AS-201ENST00000554476 325 ntTSL 3 BASIC8.77□□□□□ -1.01
UBE4BO95155 AC087645.1-201ENST00000588528 291 ntBASIC8.77□□□□□ -1.01
UBE4BO95155 RIT2-202ENST00000589109 1156 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
UBE4BO95155 OR13Z2P-201ENST00000606338 555 ntBASIC8.77□□□□□ -1.01
UBE4BO95155 AL133520.1-201ENST00000610430 700 ntBASIC8.77□□□□□ -1.01
UBE4BO95155 FTH1-212ENST00000620041 825 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
UBE4BO95155 MED15P6-202ENST00000621415 787 ntBASIC8.77□□□□□ -1.01
UBE4BO95155 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
UBE4BO95155 STAU2-226ENST00000524104 2173 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
UBE4BO95155 SLC9A6-214ENST00000637581 4872 ntTSL 5 BASIC8.77□□□□□ -1.01
UBE4BO95155 CYP2C19-202ENST00000480405 1417 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
UBE4BO95155 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
UBE4BO95155 DAPP1-201ENST00000296414 2955 ntAPPRIS ALT1 TSL 1 (best) BASIC8.76□□□□□ -1.01
UBE4BO95155 ZNF174-203ENST00000571936 1586 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
UBE4BO95155 OR6N1-203ENST00000641846 2640 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
UBE4BO95155 ZMYND8-203ENST00000352431 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
UBE4BO95155 LL22NC03-63E9.3-201ENST00000407120 3111 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
UBE4BO95155 KCNH7-202ENST00000332142 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
UBE4BO95155 AC107058.1-201ENST00000513297 1384 ntBASIC8.76□□□□□ -1.01
UBE4BO95155 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
UBE4BO95155 AURKA-201ENST00000312783 2223 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
UBE4BO95155 CACNB4-250ENST00000637418 2015 ntTSL 5 BASIC8.76□□□□□ -1.01
UBE4BO95155 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
UBE4BO95155 LINC02282-201ENST00000535153 1655 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
UBE4BO95155 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
UBE4BO95155 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
UBE4BO95155 AP001347.1-201ENST00000428809 1332 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
UBE4BO95155 ALDOB-201ENST00000374855 2451 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
UBE4BO95155 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC8.76□□□□□ -1.01
UBE4BO95155 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC8.76□□□□□ -1.01
UBE4BO95155 CWC27-204ENST00000508024 2103 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
UBE4BO95155 TSSK4-201ENST00000287913 1257 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
UBE4BO95155 BTF3-201ENST00000335895 897 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
UBE4BO95155 HMGB1P39-201ENST00000366304 880 ntBASIC8.76□□□□□ -1.01
UBE4BO95155 MUC1-205ENST00000368389 543 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
UBE4BO95155 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
UBE4BO95155 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
UBE4BO95155 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
UBE4BO95155 FHL1-203ENST00000370676 833 ntTSL 5 BASIC8.76□□□□□ -1.01
UBE4BO95155 EEF1AKMT1-202ENST00000382758 1042 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
UBE4BO95155 RCAN3-203ENST00000412742 667 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
UBE4BO95155 OR10G8-201ENST00000431524 1045 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
UBE4BO95155 AC007879.1-201ENST00000435643 554 ntTSL 4 BASIC8.76□□□□□ -1.01
UBE4BO95155 AL022721.1-201ENST00000436521 505 ntBASIC8.76□□□□□ -1.01
UBE4BO95155 AL021154.1-201ENST00000451217 456 ntTSL 3 BASIC8.76□□□□□ -1.01
UBE4BO95155 AZI2-207ENST00000457172 1136 ntTSL 5 BASIC8.76□□□□□ -1.01
UBE4BO95155 RN7SL263P-201ENST00000467969 290 ntBASIC8.76□□□□□ -1.01
UBE4BO95155 RPL7AP26-201ENST00000488538 813 ntBASIC8.76□□□□□ -1.01
UBE4BO95155 NR1I3-226ENST00000508740 977 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
UBE4BO95155 NACAP1-202ENST00000519039 641 ntBASIC8.76□□□□□ -1.01
UBE4BO95155 AP000445.1-201ENST00000526692 741 ntBASIC8.76□□□□□ -1.01
UBE4BO95155 AP000911.4-201ENST00000532272 516 ntTSL 4 BASIC8.76□□□□□ -1.01
UBE4BO95155 AC027020.1-201ENST00000559349 632 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
UBE4BO95155 AC007495.1-202ENST00000565155 559 ntTSL 2 BASIC8.76□□□□□ -1.01
UBE4BO95155 AC010761.2-202ENST00000582536 391 ntTSL 5 BASIC8.76□□□□□ -1.01
UBE4BO95155 AC006115.1-201ENST00000599726 517 ntTSL 5 BASIC8.76□□□□□ -1.01
UBE4BO95155 AC010530.1-201ENST00000602844 569 ntTSL 4 BASIC8.76□□□□□ -1.01
UBE4BO95155 AL136304.1-201ENST00000607790 509 ntBASIC8.76□□□□□ -1.01
UBE4BO95155 AC079779.3-218ENST00000612487 940 ntTSL 5 BASIC8.76□□□□□ -1.01
UBE4BO95155 ZCCHC17-209ENST00000627541 1158 ntTSL 5 BASIC8.76□□□□□ -1.01
UBE4BO95155 GCSAML-211ENST00000623578 3959 ntAPPRIS ALT2 TSL 4 BASIC8.76□□□□□ -1.01
UBE4BO95155 MTIF2-203ENST00000394600 2221 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
UBE4BO95155 ZNF780A-202ENST00000414720 2396 ntTSL 2 BASIC8.76□□□□□ -1.01
UBE4BO95155 AC110926.1-201ENST00000412499 2825 ntBASIC8.76□□□□□ -1.01
UBE4BO95155 BBS12-203ENST00000542236 3431 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
UBE4BO95155 ARMC3-204ENST00000409983 2779 ntAPPRIS ALT2 TSL 2 BASIC8.75□□□□□ -1.01
UBE4BO95155 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC8.75□□□□□ -1.01
UBE4BO95155 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC8.75□□□□□ -1.01
UBE4BO95155 CD200-203ENST00000473539 1524 ntTSL 2 BASIC8.75□□□□□ -1.01
UBE4BO95155 DDX21-201ENST00000354185 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
UBE4BO95155 LINC01800-201ENST00000445865 1977 ntTSL 2 BASIC8.75□□□□□ -1.01
UBE4BO95155 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
UBE4BO95155 MTRF1-202ENST00000379477 1948 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
UBE4BO95155 GLRA4-201ENST00000372617 1795 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
UBE4BO95155 NUSAP1-203ENST00000450592 1301 ntAPPRIS ALT2 TSL 2 BASIC8.75□□□□□ -1.01
UBE4BO95155 POLR1B-204ENST00000417433 3836 ntTSL 2 BASIC8.75□□□□□ -1.01
UBE4BO95155 NAA40-202ENST00000377793 3664 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
UBE4BO95155 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC8.75□□□□□ -1.01
UBE4BO95155 KIF4B-201ENST00000435029 4378 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
UBE4BO95155 AC016027.2-201ENST00000441167 2493 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
UBE4BO95155 LDHA-201ENST00000227157 1887 ntTSL 3 BASIC8.75□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms