Protein–RNA interactions for Protein: Q9NR80

ARHGEF4, Rho guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4Q9NR80 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ARHGEF4Q9NR80 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ARHGEF4Q9NR80 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.18■□□□□ 0.98
ARHGEF4Q9NR80 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.18■□□□□ 0.98
ARHGEF4Q9NR80 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.18■□□□□ 0.98
ARHGEF4Q9NR80 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.18■□□□□ 0.98
ARHGEF4Q9NR80 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.18■□□□□ 0.98
ARHGEF4Q9NR80 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.18■□□□□ 0.98
ARHGEF4Q9NR80 UNC93B5-201ENST00000530315 699 ntBASIC21.18■□□□□ 0.98
ARHGEF4Q9NR80 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
ARHGEF4Q9NR80 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ARHGEF4Q9NR80 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ARHGEF4Q9NR80 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.18■□□□□ 0.98
ARHGEF4Q9NR80 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ARHGEF4Q9NR80 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.17■□□□□ 0.98
ARHGEF4Q9NR80 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
ARHGEF4Q9NR80 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.17■□□□□ 0.98
ARHGEF4Q9NR80 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
ARHGEF4Q9NR80 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ARHGEF4Q9NR80 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ARHGEF4Q9NR80 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
ARHGEF4Q9NR80 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ARHGEF4Q9NR80 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
ARHGEF4Q9NR80 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ARHGEF4Q9NR80 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ARHGEF4Q9NR80 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ARHGEF4Q9NR80 AC073314.1-201ENST00000568729 2216 ntBASIC21.17■□□□□ 0.98
ARHGEF4Q9NR80 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ARHGEF4Q9NR80 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ARHGEF4Q9NR80 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.16■□□□□ 0.98
ARHGEF4Q9NR80 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ARHGEF4Q9NR80 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ARHGEF4Q9NR80 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ARHGEF4Q9NR80 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ARHGEF4Q9NR80 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ARHGEF4Q9NR80 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ARHGEF4Q9NR80 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
ARHGEF4Q9NR80 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ARHGEF4Q9NR80 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ARHGEF4Q9NR80 AC026366.1-201ENST00000488803 879 ntBASIC21.16■□□□□ 0.98
ARHGEF4Q9NR80 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.16■□□□□ 0.98
ARHGEF4Q9NR80 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ARHGEF4Q9NR80 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ARHGEF4Q9NR80 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ARHGEF4Q9NR80 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ARHGEF4Q9NR80 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.16■□□□□ 0.98
ARHGEF4Q9NR80 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ARHGEF4Q9NR80 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ARHGEF4Q9NR80 AP005212.1-201ENST00000581547 1997 ntBASIC21.16■□□□□ 0.98
ARHGEF4Q9NR80 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ARHGEF4Q9NR80 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
ARHGEF4Q9NR80 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ARHGEF4Q9NR80 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.15■□□□□ 0.98
ARHGEF4Q9NR80 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ARHGEF4Q9NR80 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
ARHGEF4Q9NR80 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
ARHGEF4Q9NR80 KRT18P68-201ENST00000392293 1000 ntBASIC21.15■□□□□ 0.98
ARHGEF4Q9NR80 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ARHGEF4Q9NR80 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ARHGEF4Q9NR80 AC128676.1-201ENST00000454392 318 ntBASIC21.15■□□□□ 0.98
ARHGEF4Q9NR80 AC098590.1-201ENST00000468126 897 ntBASIC21.15■□□□□ 0.98
ARHGEF4Q9NR80 RPS2P52-201ENST00000469610 820 ntBASIC21.15■□□□□ 0.98
ARHGEF4Q9NR80 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.15■□□□□ 0.98
ARHGEF4Q9NR80 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ARHGEF4Q9NR80 AP003097.1-201ENST00000530657 1135 ntBASIC21.15■□□□□ 0.98
ARHGEF4Q9NR80 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ARHGEF4Q9NR80 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
ARHGEF4Q9NR80 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
ARHGEF4Q9NR80 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.15■□□□□ 0.98
ARHGEF4Q9NR80 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
ARHGEF4Q9NR80 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
ARHGEF4Q9NR80 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ARHGEF4Q9NR80 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.98
ARHGEF4Q9NR80 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ARHGEF4Q9NR80 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ARHGEF4Q9NR80 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.14■□□□□ 0.97
ARHGEF4Q9NR80 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.14■□□□□ 0.97
ARHGEF4Q9NR80 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ARHGEF4Q9NR80 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ARHGEF4Q9NR80 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.14■□□□□ 0.97
ARHGEF4Q9NR80 LINC01006-201ENST00000333319 2292 ntBASIC21.14■□□□□ 0.97
ARHGEF4Q9NR80 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.14■□□□□ 0.97
ARHGEF4Q9NR80 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.14■□□□□ 0.97
ARHGEF4Q9NR80 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ARHGEF4Q9NR80 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
ARHGEF4Q9NR80 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
ARHGEF4Q9NR80 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ARHGEF4Q9NR80 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
ARHGEF4Q9NR80 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ARHGEF4Q9NR80 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ARHGEF4Q9NR80 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.13■□□□□ 0.97
ARHGEF4Q9NR80 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ARHGEF4Q9NR80 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.13■□□□□ 0.97
ARHGEF4Q9NR80 AC060766.5-201ENST00000590539 871 ntBASIC21.13■□□□□ 0.97
ARHGEF4Q9NR80 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.13■□□□□ 0.97
ARHGEF4Q9NR80 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ARHGEF4Q9NR80 MIR2861-201ENST00000636310 90 ntBASIC21.13■□□□□ 0.97
ARHGEF4Q9NR80 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ARHGEF4Q9NR80 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.12■□□□□ 0.97
ARHGEF4Q9NR80 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms