Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC22.24■■□□□ 1.15
RNF39Q9H2S5 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC22.24■■□□□ 1.15
RNF39Q9H2S5 RDM1-219ENST00000615378 542 ntTSL 3 BASIC22.24■■□□□ 1.15
RNF39Q9H2S5 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC22.24■■□□□ 1.15
RNF39Q9H2S5 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.24■■□□□ 1.15
RNF39Q9H2S5 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.24■■□□□ 1.15
RNF39Q9H2S5 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC22.24■■□□□ 1.15
RNF39Q9H2S5 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RNF39Q9H2S5 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
RNF39Q9H2S5 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF39Q9H2S5 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF39Q9H2S5 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF39Q9H2S5 AC040160.2-201ENST00000623816 1675 ntBASIC22.23■■□□□ 1.15
RNF39Q9H2S5 AC087633.2-202ENST00000565166 1439 ntBASIC22.23■■□□□ 1.15
RNF39Q9H2S5 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF39Q9H2S5 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.23■■□□□ 1.15
RNF39Q9H2S5 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RNF39Q9H2S5 ZNF736P1Y-201ENST00000440402 1276 ntBASIC22.23■■□□□ 1.15
RNF39Q9H2S5 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
RNF39Q9H2S5 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC22.23■■□□□ 1.15
RNF39Q9H2S5 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC22.23■■□□□ 1.15
RNF39Q9H2S5 AP003097.1-201ENST00000530657 1135 ntBASIC22.23■■□□□ 1.15
RNF39Q9H2S5 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC22.23■■□□□ 1.15
RNF39Q9H2S5 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RNF39Q9H2S5 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC22.23■■□□□ 1.15
RNF39Q9H2S5 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC22.23■■□□□ 1.15
RNF39Q9H2S5 AC097655.1-201ENST00000635075 318 ntBASIC22.23■■□□□ 1.15
RNF39Q9H2S5 LRRIQ3-203ENST00000370911 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF39Q9H2S5 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
RNF39Q9H2S5 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.23■■□□□ 1.15
RNF39Q9H2S5 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RNF39Q9H2S5 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.23■■□□□ 1.15
RNF39Q9H2S5 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF39Q9H2S5 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.23■■□□□ 1.15
RNF39Q9H2S5 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RNF39Q9H2S5 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF39Q9H2S5 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF39Q9H2S5 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF39Q9H2S5 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22.22■■□□□ 1.15
RNF39Q9H2S5 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RNF39Q9H2S5 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
RNF39Q9H2S5 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RNF39Q9H2S5 H3F3A-203ENST00000366815 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RNF39Q9H2S5 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC22.22■■□□□ 1.15
RNF39Q9H2S5 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC22.22■■□□□ 1.15
RNF39Q9H2S5 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC22.22■■□□□ 1.15
RNF39Q9H2S5 ACTR6P1-201ENST00000514311 1104 ntBASIC22.22■■□□□ 1.15
RNF39Q9H2S5 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC22.22■■□□□ 1.15
RNF39Q9H2S5 PNMA6B-201ENST00000538162 1200 ntBASIC22.22■■□□□ 1.15
RNF39Q9H2S5 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC22.22■■□□□ 1.15
RNF39Q9H2S5 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
RNF39Q9H2S5 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RNF39Q9H2S5 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RNF39Q9H2S5 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RNF39Q9H2S5 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
RNF39Q9H2S5 GIMAP7-201ENST00000313543 1256 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF39Q9H2S5 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF39Q9H2S5 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF39Q9H2S5 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC22.21■■□□□ 1.15
RNF39Q9H2S5 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC22.21■■□□□ 1.15
RNF39Q9H2S5 RPS2P52-201ENST00000469610 820 ntBASIC22.21■■□□□ 1.15
RNF39Q9H2S5 AC026616.1-201ENST00000523157 525 ntBASIC22.21■■□□□ 1.15
RNF39Q9H2S5 AL591767.1-201ENST00000557160 568 ntTSL 4 BASIC22.21■■□□□ 1.15
RNF39Q9H2S5 AL353708.1-201ENST00000567904 1257 ntBASIC22.21■■□□□ 1.15
RNF39Q9H2S5 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF39Q9H2S5 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
RNF39Q9H2S5 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RNF39Q9H2S5 AC092368.3-202ENST00000574180 1591 ntBASIC22.21■■□□□ 1.15
RNF39Q9H2S5 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF39Q9H2S5 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RNF39Q9H2S5 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.2■■□□□ 1.14
RNF39Q9H2S5 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF39Q9H2S5 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RNF39Q9H2S5 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF39Q9H2S5 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.2■■□□□ 1.14
RNF39Q9H2S5 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF39Q9H2S5 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC22.2■■□□□ 1.14
RNF39Q9H2S5 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC22.2■■□□□ 1.14
RNF39Q9H2S5 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC22.2■■□□□ 1.14
RNF39Q9H2S5 SLC29A4P2-201ENST00000504749 1089 ntBASIC22.2■■□□□ 1.14
RNF39Q9H2S5 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC22.2■■□□□ 1.14
RNF39Q9H2S5 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC22.2■■□□□ 1.14
RNF39Q9H2S5 C2orf69P4-201ENST00000565394 541 ntBASIC22.2■■□□□ 1.14
RNF39Q9H2S5 AC073648.6-201ENST00000641589 218 ntBASIC22.2■■□□□ 1.14
RNF39Q9H2S5 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
RNF39Q9H2S5 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RNF39Q9H2S5 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RNF39Q9H2S5 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RNF39Q9H2S5 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF39Q9H2S5 AC011484.1-201ENST00000377652 1995 ntBASIC22.19■■□□□ 1.14
RNF39Q9H2S5 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF39Q9H2S5 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF39Q9H2S5 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
RNF39Q9H2S5 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
RNF39Q9H2S5 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RNF39Q9H2S5 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RNF39Q9H2S5 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
RNF39Q9H2S5 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC22.19■■□□□ 1.14
RNF39Q9H2S5 NRXN1-234ENST00000630656 837 ntTSL 5 BASIC22.19■■□□□ 1.14
RNF39Q9H2S5 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms