Protein–RNA interactions for Protein: Q9C0C6

CIPC, CLOCK-interacting pacemaker, humanhuman

Predictions only

Length 399 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIPCQ9C0C6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CIPCQ9C0C6 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.69■□□□□ 0.9
CIPCQ9C0C6 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CIPCQ9C0C6 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.69■□□□□ 0.9
CIPCQ9C0C6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CIPCQ9C0C6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CIPCQ9C0C6 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CIPCQ9C0C6 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.68■□□□□ 0.9
CIPCQ9C0C6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.68■□□□□ 0.9
CIPCQ9C0C6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CIPCQ9C0C6 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CIPCQ9C0C6 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CIPCQ9C0C6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CIPCQ9C0C6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CIPCQ9C0C6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CIPCQ9C0C6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CIPCQ9C0C6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CIPCQ9C0C6 AL390719.1-204ENST00000412397 1219 ntBASIC20.68■□□□□ 0.9
CIPCQ9C0C6 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.68■□□□□ 0.9
CIPCQ9C0C6 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CIPCQ9C0C6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.68■□□□□ 0.9
CIPCQ9C0C6 AL359736.2-201ENST00000621992 437 ntBASIC20.68■□□□□ 0.9
CIPCQ9C0C6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CIPCQ9C0C6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CIPCQ9C0C6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.68■□□□□ 0.9
CIPCQ9C0C6 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.68■□□□□ 0.9
CIPCQ9C0C6 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CIPCQ9C0C6 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CIPCQ9C0C6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CIPCQ9C0C6 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CIPCQ9C0C6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CIPCQ9C0C6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.67■□□□□ 0.9
CIPCQ9C0C6 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CIPCQ9C0C6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.67■□□□□ 0.9
CIPCQ9C0C6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CIPCQ9C0C6 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.67■□□□□ 0.9
CIPCQ9C0C6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.67■□□□□ 0.9
CIPCQ9C0C6 AC005829.2-201ENST00000571422 1056 ntBASIC20.67■□□□□ 0.9
CIPCQ9C0C6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CIPCQ9C0C6 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CIPCQ9C0C6 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CIPCQ9C0C6 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CIPCQ9C0C6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.67■□□□□ 0.9
CIPCQ9C0C6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.67■□□□□ 0.9
CIPCQ9C0C6 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CIPCQ9C0C6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
CIPCQ9C0C6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.67■□□□□ 0.9
CIPCQ9C0C6 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CIPCQ9C0C6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CIPCQ9C0C6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CIPCQ9C0C6 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CIPCQ9C0C6 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CIPCQ9C0C6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.66■□□□□ 0.9
CIPCQ9C0C6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.66■□□□□ 0.9
CIPCQ9C0C6 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CIPCQ9C0C6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CIPCQ9C0C6 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CIPCQ9C0C6 RPPH1-201ENST00000516869 333 ntBASIC20.66■□□□□ 0.9
CIPCQ9C0C6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.66■□□□□ 0.9
CIPCQ9C0C6 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CIPCQ9C0C6 RN7SL471P-201ENST00000580476 299 ntBASIC20.66■□□□□ 0.9
CIPCQ9C0C6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.66■□□□□ 0.9
CIPCQ9C0C6 MIR2861-201ENST00000636310 90 ntBASIC20.66■□□□□ 0.9
CIPCQ9C0C6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
CIPCQ9C0C6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.66■□□□□ 0.9
CIPCQ9C0C6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CIPCQ9C0C6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CIPCQ9C0C6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CIPCQ9C0C6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CIPCQ9C0C6 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.66■□□□□ 0.9
CIPCQ9C0C6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CIPCQ9C0C6 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.66■□□□□ 0.9
CIPCQ9C0C6 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.66■□□□□ 0.9
CIPCQ9C0C6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CIPCQ9C0C6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CIPCQ9C0C6 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.65■□□□□ 0.9
CIPCQ9C0C6 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.65■□□□□ 0.9
CIPCQ9C0C6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CIPCQ9C0C6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.65■□□□□ 0.9
CIPCQ9C0C6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CIPCQ9C0C6 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CIPCQ9C0C6 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CIPCQ9C0C6 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.65■□□□□ 0.9
CIPCQ9C0C6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.65■□□□□ 0.9
CIPCQ9C0C6 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CIPCQ9C0C6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CIPCQ9C0C6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.65■□□□□ 0.9
CIPCQ9C0C6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.65■□□□□ 0.9
CIPCQ9C0C6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.65■□□□□ 0.9
CIPCQ9C0C6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CIPCQ9C0C6 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CIPCQ9C0C6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
CIPCQ9C0C6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.65■□□□□ 0.9
CIPCQ9C0C6 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CIPCQ9C0C6 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CIPCQ9C0C6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CIPCQ9C0C6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CIPCQ9C0C6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.64■□□□□ 0.9
CIPCQ9C0C6 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CIPCQ9C0C6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms