Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.89■□□□□ 0.29
PCGF1Q9BSM1 AC097658.1-201ENST00000475555 843 ntBASIC16.89■□□□□ 0.29
PCGF1Q9BSM1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCGF1Q9BSM1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.89■□□□□ 0.29
PCGF1Q9BSM1 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PCGF1Q9BSM1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
PCGF1Q9BSM1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
PCGF1Q9BSM1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCGF1Q9BSM1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
PCGF1Q9BSM1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.89■□□□□ 0.29
PCGF1Q9BSM1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCGF1Q9BSM1 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCGF1Q9BSM1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PCGF1Q9BSM1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCGF1Q9BSM1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
PCGF1Q9BSM1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.89■□□□□ 0.29
PCGF1Q9BSM1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.89■□□□□ 0.29
PCGF1Q9BSM1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCGF1Q9BSM1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCGF1Q9BSM1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.88■□□□□ 0.29
PCGF1Q9BSM1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCGF1Q9BSM1 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCGF1Q9BSM1 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.88■□□□□ 0.29
PCGF1Q9BSM1 MCRIP2P1-201ENST00000394346 511 ntBASIC16.88■□□□□ 0.29
PCGF1Q9BSM1 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.88■□□□□ 0.29
PCGF1Q9BSM1 DUSP5P2-201ENST00000426873 1033 ntBASIC16.88■□□□□ 0.29
PCGF1Q9BSM1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.88■□□□□ 0.29
PCGF1Q9BSM1 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.88■□□□□ 0.29
PCGF1Q9BSM1 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.88■□□□□ 0.29
PCGF1Q9BSM1 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.88■□□□□ 0.29
PCGF1Q9BSM1 RNA5SP413-201ENST00000516373 109 ntBASIC16.88■□□□□ 0.29
PCGF1Q9BSM1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.88■□□□□ 0.29
PCGF1Q9BSM1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.88■□□□□ 0.29
PCGF1Q9BSM1 CYP2T3P-201ENST00000601990 817 ntBASIC16.88■□□□□ 0.29
PCGF1Q9BSM1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCGF1Q9BSM1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCGF1Q9BSM1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.88■□□□□ 0.29
PCGF1Q9BSM1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCGF1Q9BSM1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PCGF1Q9BSM1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCGF1Q9BSM1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCGF1Q9BSM1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCGF1Q9BSM1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCGF1Q9BSM1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCGF1Q9BSM1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
PCGF1Q9BSM1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCGF1Q9BSM1 KRT17P1-201ENST00000399211 1546 ntBASIC16.87■□□□□ 0.29
PCGF1Q9BSM1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCGF1Q9BSM1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCGF1Q9BSM1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.87■□□□□ 0.29
PCGF1Q9BSM1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCGF1Q9BSM1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.87■□□□□ 0.29
PCGF1Q9BSM1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PCGF1Q9BSM1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCGF1Q9BSM1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.87■□□□□ 0.29
PCGF1Q9BSM1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.87■□□□□ 0.29
PCGF1Q9BSM1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.87■□□□□ 0.29
PCGF1Q9BSM1 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.87■□□□□ 0.29
PCGF1Q9BSM1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PCGF1Q9BSM1 AC100791.3-201ENST00000617619 330 ntBASIC16.87■□□□□ 0.29
PCGF1Q9BSM1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PCGF1Q9BSM1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCGF1Q9BSM1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.87■□□□□ 0.29
PCGF1Q9BSM1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCGF1Q9BSM1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
PCGF1Q9BSM1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCGF1Q9BSM1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCGF1Q9BSM1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PCGF1Q9BSM1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.86■□□□□ 0.29
PCGF1Q9BSM1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PCGF1Q9BSM1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCGF1Q9BSM1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCGF1Q9BSM1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PCGF1Q9BSM1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.86■□□□□ 0.29
PCGF1Q9BSM1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.86■□□□□ 0.29
PCGF1Q9BSM1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCGF1Q9BSM1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.86■□□□□ 0.29
PCGF1Q9BSM1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.86■□□□□ 0.29
PCGF1Q9BSM1 AC091874.3-201ENST00000512672 1195 ntBASIC16.86■□□□□ 0.29
PCGF1Q9BSM1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.86■□□□□ 0.29
PCGF1Q9BSM1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.86■□□□□ 0.29
PCGF1Q9BSM1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.86■□□□□ 0.29
PCGF1Q9BSM1 AL589743.5-201ENST00000616611 1050 ntBASIC16.86■□□□□ 0.29
PCGF1Q9BSM1 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.86■□□□□ 0.29
PCGF1Q9BSM1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.86■□□□□ 0.29
PCGF1Q9BSM1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCGF1Q9BSM1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCGF1Q9BSM1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCGF1Q9BSM1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCGF1Q9BSM1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCGF1Q9BSM1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCGF1Q9BSM1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCGF1Q9BSM1 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCGF1Q9BSM1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCGF1Q9BSM1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.85■□□□□ 0.29
PCGF1Q9BSM1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCGF1Q9BSM1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCGF1Q9BSM1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCGF1Q9BSM1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
PCGF1Q9BSM1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms