Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SEMA3CQ99985 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.52■□□□□ 0.88
SEMA3CQ99985 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.52■□□□□ 0.88
SEMA3CQ99985 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.52■□□□□ 0.88
SEMA3CQ99985 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.52■□□□□ 0.88
SEMA3CQ99985 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.52■□□□□ 0.88
SEMA3CQ99985 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.52■□□□□ 0.88
SEMA3CQ99985 MIR4758-201ENST00000577688 71 ntBASIC20.52■□□□□ 0.88
SEMA3CQ99985 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.52■□□□□ 0.88
SEMA3CQ99985 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
SEMA3CQ99985 AC066615.1-201ENST00000640911 628 ntBASIC20.52■□□□□ 0.88
SEMA3CQ99985 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SEMA3CQ99985 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SEMA3CQ99985 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.52■□□□□ 0.87
SEMA3CQ99985 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.52■□□□□ 0.87
SEMA3CQ99985 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.52■□□□□ 0.87
SEMA3CQ99985 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.51■□□□□ 0.87
SEMA3CQ99985 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.51■□□□□ 0.87
SEMA3CQ99985 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.51■□□□□ 0.87
SEMA3CQ99985 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.51■□□□□ 0.87
SEMA3CQ99985 DUSP5P2-201ENST00000426873 1033 ntBASIC20.51■□□□□ 0.87
SEMA3CQ99985 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.51■□□□□ 0.87
SEMA3CQ99985 AC098934.4-201ENST00000564127 592 ntBASIC20.51■□□□□ 0.87
SEMA3CQ99985 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.51■□□□□ 0.87
SEMA3CQ99985 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.51■□□□□ 0.87
SEMA3CQ99985 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.51■□□□□ 0.87
SEMA3CQ99985 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEMA3CQ99985 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SEMA3CQ99985 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEMA3CQ99985 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.51■□□□□ 0.87
SEMA3CQ99985 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.51■□□□□ 0.87
SEMA3CQ99985 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SEMA3CQ99985 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SEMA3CQ99985 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.5■□□□□ 0.87
SEMA3CQ99985 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SEMA3CQ99985 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.5■□□□□ 0.87
SEMA3CQ99985 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SEMA3CQ99985 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SEMA3CQ99985 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
SEMA3CQ99985 C2orf69P4-201ENST00000565394 541 ntBASIC20.5■□□□□ 0.87
SEMA3CQ99985 AC142086.2-201ENST00000569753 217 ntBASIC20.5■□□□□ 0.87
SEMA3CQ99985 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.5■□□□□ 0.87
SEMA3CQ99985 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SEMA3CQ99985 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SEMA3CQ99985 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.5■□□□□ 0.87
SEMA3CQ99985 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SEMA3CQ99985 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SEMA3CQ99985 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.5■□□□□ 0.87
SEMA3CQ99985 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.5■□□□□ 0.87
SEMA3CQ99985 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.49■□□□□ 0.87
SEMA3CQ99985 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SEMA3CQ99985 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SEMA3CQ99985 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SEMA3CQ99985 DPP3P2-201ENST00000416030 1696 ntBASIC20.49■□□□□ 0.87
SEMA3CQ99985 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SEMA3CQ99985 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.49■□□□□ 0.87
SEMA3CQ99985 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.49■□□□□ 0.87
SEMA3CQ99985 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SEMA3CQ99985 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SEMA3CQ99985 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SEMA3CQ99985 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SEMA3CQ99985 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.49■□□□□ 0.87
SEMA3CQ99985 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SEMA3CQ99985 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SEMA3CQ99985 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA3CQ99985 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.48■□□□□ 0.87
SEMA3CQ99985 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA3CQ99985 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA3CQ99985 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA3CQ99985 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SEMA3CQ99985 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.48■□□□□ 0.87
SEMA3CQ99985 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SEMA3CQ99985 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.48■□□□□ 0.87
SEMA3CQ99985 AC091874.3-201ENST00000512672 1195 ntBASIC20.48■□□□□ 0.87
SEMA3CQ99985 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA3CQ99985 CD99P1-205ENST00000527459 561 ntBASIC20.48■□□□□ 0.87
SEMA3CQ99985 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA3CQ99985 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.48■□□□□ 0.87
SEMA3CQ99985 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.48■□□□□ 0.87
SEMA3CQ99985 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
SEMA3CQ99985 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.48■□□□□ 0.87
SEMA3CQ99985 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA3CQ99985 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA3CQ99985 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.48■□□□□ 0.87
SEMA3CQ99985 LINC01521-201ENST00000504184 1943 ntBASIC20.48■□□□□ 0.87
SEMA3CQ99985 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SEMA3CQ99985 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA3CQ99985 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.48■□□□□ 0.87
SEMA3CQ99985 SMG8-203ENST00000578922 2178 ntBASIC20.48■□□□□ 0.87
SEMA3CQ99985 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA3CQ99985 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.48■□□□□ 0.87
SEMA3CQ99985 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
SEMA3CQ99985 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
SEMA3CQ99985 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.48■□□□□ 0.87
SEMA3CQ99985 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA3CQ99985 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEMA3CQ99985 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEMA3CQ99985 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SEMA3CQ99985 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SEMA3CQ99985 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms