Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.23■□□□□ 0.83
NDNQ99608 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NDNQ99608 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.23■□□□□ 0.83
NDNQ99608 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.23■□□□□ 0.83
NDNQ99608 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.23■□□□□ 0.83
NDNQ99608 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NDNQ99608 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NDNQ99608 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NDNQ99608 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.23■□□□□ 0.83
NDNQ99608 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
NDNQ99608 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.23■□□□□ 0.83
NDNQ99608 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.23■□□□□ 0.83
NDNQ99608 AFG3L1P-217ENST00000557444 2447 ntBASIC20.23■□□□□ 0.83
NDNQ99608 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NDNQ99608 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NDNQ99608 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NDNQ99608 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.23■□□□□ 0.83
NDNQ99608 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
NDNQ99608 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
NDNQ99608 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NDNQ99608 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.22■□□□□ 0.83
NDNQ99608 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NDNQ99608 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.22■□□□□ 0.83
NDNQ99608 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
NDNQ99608 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NDNQ99608 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.22■□□□□ 0.83
NDNQ99608 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.22■□□□□ 0.83
NDNQ99608 CDV3P1-201ENST00000471403 739 ntBASIC20.22■□□□□ 0.83
NDNQ99608 TERF1P5-201ENST00000477545 1207 ntBASIC20.22■□□□□ 0.83
NDNQ99608 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NDNQ99608 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NDNQ99608 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NDNQ99608 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NDNQ99608 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.22■□□□□ 0.83
NDNQ99608 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
NDNQ99608 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.22■□□□□ 0.83
NDNQ99608 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NDNQ99608 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NDNQ99608 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NDNQ99608 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
NDNQ99608 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NDNQ99608 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
NDNQ99608 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NDNQ99608 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.21■□□□□ 0.83
NDNQ99608 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NDNQ99608 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.21■□□□□ 0.83
NDNQ99608 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NDNQ99608 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NDNQ99608 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NDNQ99608 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NDNQ99608 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NDNQ99608 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.21■□□□□ 0.83
NDNQ99608 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NDNQ99608 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NDNQ99608 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
NDNQ99608 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.83
NDNQ99608 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.2■□□□□ 0.82
NDNQ99608 AC087289.5-201ENST00000586076 3175 ntBASIC20.2■□□□□ 0.82
NDNQ99608 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.2■□□□□ 0.82
NDNQ99608 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NDNQ99608 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.2■□□□□ 0.82
NDNQ99608 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NDNQ99608 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NDNQ99608 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.2■□□□□ 0.82
NDNQ99608 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
NDNQ99608 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NDNQ99608 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.2■□□□□ 0.82
NDNQ99608 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.2■□□□□ 0.82
NDNQ99608 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.2■□□□□ 0.82
NDNQ99608 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
NDNQ99608 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NDNQ99608 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NDNQ99608 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
NDNQ99608 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.2■□□□□ 0.82
NDNQ99608 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NDNQ99608 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NDNQ99608 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.2■□□□□ 0.82
NDNQ99608 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NDNQ99608 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
NDNQ99608 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
NDNQ99608 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
NDNQ99608 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NDNQ99608 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.19■□□□□ 0.82
NDNQ99608 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.19■□□□□ 0.82
NDNQ99608 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
NDNQ99608 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NDNQ99608 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NDNQ99608 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NDNQ99608 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.19■□□□□ 0.82
NDNQ99608 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.19■□□□□ 0.82
NDNQ99608 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
NDNQ99608 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.19■□□□□ 0.82
NDNQ99608 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.19■□□□□ 0.82
NDNQ99608 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.19■□□□□ 0.82
NDNQ99608 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NDNQ99608 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
NDNQ99608 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
NDNQ99608 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.19■□□□□ 0.82
NDNQ99608 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
NDNQ99608 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms