Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.89■□□□□ 0.93
PRICKLE1Q96MT3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PRICKLE1Q96MT3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRICKLE1Q96MT3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
PRICKLE1Q96MT3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.89■□□□□ 0.93
PRICKLE1Q96MT3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.89■□□□□ 0.93
PRICKLE1Q96MT3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRICKLE1Q96MT3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.89■□□□□ 0.93
PRICKLE1Q96MT3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRICKLE1Q96MT3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
PRICKLE1Q96MT3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.89■□□□□ 0.93
PRICKLE1Q96MT3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
PRICKLE1Q96MT3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PRICKLE1Q96MT3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRICKLE1Q96MT3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRICKLE1Q96MT3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRICKLE1Q96MT3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRICKLE1Q96MT3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRICKLE1Q96MT3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PRICKLE1Q96MT3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PRICKLE1Q96MT3 ESRRAP1-201ENST00000400596 1257 ntBASIC20.88■□□□□ 0.93
PRICKLE1Q96MT3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRICKLE1Q96MT3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.88■□□□□ 0.93
PRICKLE1Q96MT3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PRICKLE1Q96MT3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.88■□□□□ 0.93
PRICKLE1Q96MT3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.88■□□□□ 0.93
PRICKLE1Q96MT3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.88■□□□□ 0.93
PRICKLE1Q96MT3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.88■□□□□ 0.93
PRICKLE1Q96MT3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRICKLE1Q96MT3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRICKLE1Q96MT3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.88■□□□□ 0.93
PRICKLE1Q96MT3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
PRICKLE1Q96MT3 FP700111.2-201ENST00000619190 1892 ntBASIC20.88■□□□□ 0.93
PRICKLE1Q96MT3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
PRICKLE1Q96MT3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRICKLE1Q96MT3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRICKLE1Q96MT3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRICKLE1Q96MT3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.87■□□□□ 0.93
PRICKLE1Q96MT3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.87■□□□□ 0.93
PRICKLE1Q96MT3 FAM201B-201ENST00000458407 597 ntBASIC20.87■□□□□ 0.93
PRICKLE1Q96MT3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRICKLE1Q96MT3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRICKLE1Q96MT3 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.87■□□□□ 0.93
PRICKLE1Q96MT3 AP003097.1-201ENST00000530657 1135 ntBASIC20.87■□□□□ 0.93
PRICKLE1Q96MT3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRICKLE1Q96MT3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.87■□□□□ 0.93
PRICKLE1Q96MT3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRICKLE1Q96MT3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRICKLE1Q96MT3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.86■□□□□ 0.93
PRICKLE1Q96MT3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PRICKLE1Q96MT3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.86■□□□□ 0.93
PRICKLE1Q96MT3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.86■□□□□ 0.93
PRICKLE1Q96MT3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRICKLE1Q96MT3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRICKLE1Q96MT3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRICKLE1Q96MT3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.86■□□□□ 0.93
PRICKLE1Q96MT3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.86■□□□□ 0.93
PRICKLE1Q96MT3 AC008403.3-201ENST00000598924 454 ntBASIC20.86■□□□□ 0.93
PRICKLE1Q96MT3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.86■□□□□ 0.93
PRICKLE1Q96MT3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRICKLE1Q96MT3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRICKLE1Q96MT3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRICKLE1Q96MT3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRICKLE1Q96MT3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PRICKLE1Q96MT3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRICKLE1Q96MT3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PRICKLE1Q96MT3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRICKLE1Q96MT3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.85■□□□□ 0.93
PRICKLE1Q96MT3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRICKLE1Q96MT3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.85■□□□□ 0.93
PRICKLE1Q96MT3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRICKLE1Q96MT3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRICKLE1Q96MT3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRICKLE1Q96MT3 AC026366.1-201ENST00000488803 879 ntBASIC20.85■□□□□ 0.93
PRICKLE1Q96MT3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.85■□□□□ 0.93
PRICKLE1Q96MT3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRICKLE1Q96MT3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRICKLE1Q96MT3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.85■□□□□ 0.93
PRICKLE1Q96MT3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRICKLE1Q96MT3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRICKLE1Q96MT3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRICKLE1Q96MT3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
PRICKLE1Q96MT3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.84■□□□□ 0.93
PRICKLE1Q96MT3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.84■□□□□ 0.93
PRICKLE1Q96MT3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.84■□□□□ 0.93
PRICKLE1Q96MT3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.84■□□□□ 0.93
PRICKLE1Q96MT3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PRICKLE1Q96MT3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRICKLE1Q96MT3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
PRICKLE1Q96MT3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRICKLE1Q96MT3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PRICKLE1Q96MT3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRICKLE1Q96MT3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRICKLE1Q96MT3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PRICKLE1Q96MT3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
PRICKLE1Q96MT3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.84■□□□□ 0.93
PRICKLE1Q96MT3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.84■□□□□ 0.93
PRICKLE1Q96MT3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRICKLE1Q96MT3 SOX15-203ENST00000570788 1093 ntBASIC20.84■□□□□ 0.93
PRICKLE1Q96MT3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms